RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 ANGPT4Q9Y264 503 aa8.68□□□□□ -1.02
HDAC3-208ENST00000476739 ARL2BPQ9Y2Y0 163 aa8.68□□□□□ -1.02
HDAC3-208ENST00000476739 TMED7Q9Y3B3 224 aa8.68□□□□□ -1.02
HDAC3-208ENST00000476739 ZNF175Q9Y473 711 aa8.68□□□□□ -1.02
HDAC3-208ENST00000476739 IGHV3-15A0A0B4J1V0 119 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 A0A1W2PNV4 684 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 ZC3H12DA2A288 527 aaKnown RBP8.67□□□□□ -1.02
HDAC3-208ENST00000476739 NME4O00746 187 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 DVL2O14641 736 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 AHCYL1O43865 530 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 CD247P20963 164 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 PCGF2P35227 344 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 SLC1A3P43003 542 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 KIR2DL2P43627 348 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-208ENST00000476739 NUDT2P50583 147 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 POLR2HP52434 150 aaKnown RBP8.67□□□□□ -1.02
HDAC3-208ENST00000476739 SIRPAP78324 504 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 BNIP2Q12982 314 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 GUSBP1Q15486 140 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 ZNF239Q16600 458 aaKnown RBP8.67□□□□□ -1.02
HDAC3-208ENST00000476739 SLC25A35Q3KQZ1 300 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 SYT14P1Q58G82 188 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 ZNF550Q7Z398 422 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 BTLAQ7Z6A9 289 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 ARMC8Q8IUR7 673 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 ZNF440Q8IYI8 595 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 CADM2Q8N3J6 435 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 ACBD4Q8NC06 268 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 OR4D11Q8NGI4 311 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 C3orf49Q96BT1 292 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 STARD4Q96DR4 205 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 REXO5Q96IC2 774 aaKnown RBP8.67□□□□□ -1.02
HDAC3-208ENST00000476739 OR5B2Q96R09 309 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 ZNF607Q96SK3 696 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 SH3GL1Q99961 368 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 SPATA5L1Q9BVQ7 753 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 ARL8BQ9NVJ2 186 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 CHCHD3Q9NX63 227 aaKnown RBP8.67□□□□□ -1.02
HDAC3-208ENST00000476739 JKAMPQ9P055 326 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 STOML1Q9UBI4 398 aa8.67□□□□□ -1.02
HDAC3-208ENST00000476739 ASH1LQ9NR48 2969 aaKnown RBP8.67□□□□□ -1.02
HDAC3-208ENST00000476739 MPDZO75970 2070 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 GJE1A6NN92 205 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 FAM220BPB1ANY3 271 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 TMEM229AB2RXF0 380 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 ZNF814B7Z6K7 855 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 M0R3H8 397 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 NDUFAB1O14561 156 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 SERPINB7O75635 380 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 FAM107AO95990 144 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 IL18BPO95998 194 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 CGAP01215 116 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 TFPIP10646 304 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 IMPDH2P12268 514 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 IGFBP2P18065 325 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 PRDX6P30041 224 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 SLC7A1P30825 629 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 OPRM1P35372 400 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 HTR3AP46098 478 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 KCNJ5P48544 419 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 DIO1P49895 249 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 SLC7A2P52569 658 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 RAC3P60763 192 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 MYBPHQ13203 477 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 NPTX1Q15818 432 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 PDSS1Q5T2R2 415 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 WBP2NLQ6ICG8 309 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 TMPPEQ6ZT21 453 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 CCDC80Q76M96 950 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 LUZP2Q86TE4 346 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 TSPYL5Q86VY4 417 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-208ENST00000476739 KRT73Q86Y46 540 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 RBM45Q8IUH3 476 aaKnown RBP8.66□□□□□ -1.02
HDAC3-208ENST00000476739 FITM2Q8N6M3 262 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 CNEP1R1Q8N9A8 125 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 DRAXINQ8NBI3 349 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-208ENST00000476739 RNF128Q8TEB7 428 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 ABHD3Q8WU67 409 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 CMTM5Q96DZ9 223 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 ZFP3Q96NJ6 502 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 SFXN3Q9BWM7 321 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 PRRG4Q9BZD6 226 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 ENKD1Q9H0I2 346 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 EFCAB1Q9HAE3 211 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 CACYBPQ9HB71 228 aaKnown RBP8.66□□□□□ -1.02
HDAC3-208ENST00000476739 CHST11Q9NPF2 352 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 SERINC1Q9NRX5 453 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 PAQR5Q9NXK6 330 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-208ENST00000476739 ING1Q9UK53 422 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-208ENST00000476739 PACSIN3Q9UKS6 424 aa8.66□□□□□ -1.02
HDAC3-208ENST00000476739 MCTS1Q9ULC4 181 aaKnown RBP8.66□□□□□ -1.02
HDAC3-208ENST00000476739 FLNBO75369 2602 aaKnown RBP8.66□□□□□ -1.02
HDAC3-208ENST00000476739 PKDREJQ9NTG1 2253 aa8.65□□□□□ -1.02
HDAC3-208ENST00000476739 EEF1E1-BLOC1S5C9J1V9 151 aa8.65□□□□□ -1.02
HDAC3-208ENST00000476739 PDLIM1O00151 329 aa8.65□□□□□ -1.02
HDAC3-208ENST00000476739 SULT2B1O00204 365 aa8.65□□□□□ -1.02
HDAC3-208ENST00000476739 SYT5O00445 386 aa8.65□□□□□ -1.02
HDAC3-208ENST00000476739 SMAD9O15198 467 aaKnown RBP8.65□□□□□ -1.02
HDAC3-208ENST00000476739 EEF1E1O43324 174 aaKnown RBP8.65□□□□□ -1.02
HDAC3-208ENST00000476739 RAMP1O60894 148 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms