RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 PCBP3P57721 371 aaKnown RBP12.33□□□□□ -0.44
USF1-205ENST00000473969 RGS8P57771 180 aaPredicted RBP12.33□□□□□ -0.44
USF1-205ENST00000473969 VEZF1Q14119 521 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 RNPS1Q15287 305 aaKnown RBP12.33□□□□□ -0.44
USF1-205ENST00000473969 HACD2Q6Y1H2 254 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 RANBP3LQ86VV4 465 aaPredicted RBP12.33□□□□□ -0.44
USF1-205ENST00000473969 ADGRG3Q86Y34 549 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 SLC43A2Q8N370 569 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 SMYD1Q8NB12 490 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 CCDC197Q8NCU1 140 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 OR52E4Q8NGH9 312 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 RNF217Q8TC41 542 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 ROBO4Q8WZ75 1007 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 ZNF524Q96C55 264 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 ZNF559Q9BR84 538 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 TRIM2Q9C040 744 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 RNF122Q9H9V4 155 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 TMEM27Q9HBJ8 222 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 SLC24A3Q9HC58 644 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 FAM53CQ9NYF3 392 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 FOXD3Q9UJU5 478 aaPredicted RBP12.33□□□□□ -0.44
USF1-205ENST00000473969 HDGFL3Q9Y3E1 203 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 PCNX3Q9H6A9 2034 aa12.33□□□□□ -0.44
USF1-205ENST00000473969 A0A1W2PNV4 684 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 ELOVL7A1L3X0 281 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 FAM220BPB1ANY3 271 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 HNRNPRO43390 633 aaKnown RBP12.32□□□□□ -0.44
USF1-205ENST00000473969 TPST1O60507 370 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 ADAM11O75078 769 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 PRKD3O94806 890 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 OPN1SWP03999 348 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 C8BP07358 591 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 GRNP28799 593 aaKnown RBP12.32□□□□□ -0.44
USF1-205ENST00000473969 UQCRC1P31930 480 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 PEX19P40855 299 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 DIO1P49895 249 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 GZMMP51124 257 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 MNAT1P51948 309 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 OR2B6P58173 313 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 SIRPAP78324 504 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 MXRA7P84157 204 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 DMTNQ08495 405 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 FOXF2Q12947 444 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 ZNF239Q16600 458 aaKnown RBP12.32□□□□□ -0.44
USF1-205ENST00000473969 TMPPEQ6ZT21 453 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 CCDC80Q76M96 950 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 FCRLAQ7L513 359 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 CALHM3Q86XJ0 350 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 PROX1Q92786 737 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 GMPPAQ96IJ6 420 aaPredicted RBP12.32□□□□□ -0.44
USF1-205ENST00000473969 ZNF583Q96ND8 569 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 GPATCH1Q9BRR8 931 aaKnown RBP12.32□□□□□ -0.44
USF1-205ENST00000473969 ADAM19Q9H013 955 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 TESQ9UGI8 421 aaKnown RBP12.32□□□□□ -0.44
USF1-205ENST00000473969 TAGLN3Q9UI15 199 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 PACSIN3Q9UKS6 424 aa12.32□□□□□ -0.44
USF1-205ENST00000473969 USP9YO00507 2555 aaPredicted RBP12.31□□□□□ -0.44
USF1-205ENST00000473969 NCOA6Q14686 2063 aaPredicted RBP12.31□□□□□ -0.44
USF1-205ENST00000473969 PCNX1Q96RV3 2341 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 TMEM72A0PK05 275 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 ELOA3DA6NLF2 546 aaPredicted RBP12.31□□□□□ -0.44
USF1-205ENST00000473969 CCT8L1PA6NM43 557 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 SYT5O00445 386 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 GMNNO75496 209 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 AQP8O94778 261 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 PRG2P13727 222 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 KCNJ5P48544 419 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 SLC7A2P52569 658 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 PSME3P61289 254 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 HOXC5Q00444 222 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 LIPEQ05469 1076 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 ELOA3BQ3SY89 546 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 TMEM201Q5SNT2 666 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 HIST2H2BCQ6DN03 193 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 MEX3BQ6ZN04 569 aaKnown RBP12.31□□□□□ -0.44
USF1-205ENST00000473969 FAM214BQ7L5A3 538 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 LUZP2Q86TE4 346 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 KIF18BQ86Y91 864 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 SLC15A3Q8IY34 581 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 MICU2Q8IYU8 434 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 RELL2Q8NC24 303 aaPredicted RBP12.31□□□□□ -0.44
USF1-205ENST00000473969 ELOA3Q8NG57 546 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 DNAJA4Q8WW22 397 aaPredicted RBP12.31□□□□□ -0.44
USF1-205ENST00000473969 RNASE6Q93091 150 aaKnown RBP12.31□□□□□ -0.44
USF1-205ENST00000473969 TACO1Q9BSH4 297 aaKnown RBP12.31□□□□□ -0.44
USF1-205ENST00000473969 NAA11Q9BSU3 229 aaPredicted RBP12.31□□□□□ -0.44
USF1-205ENST00000473969 TAPBPLQ9BX59 468 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 SRXN1Q9BYN0 137 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 OR11A1Q9GZK7 315 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 COQ10BQ9H8M1 238 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 FANCFQ9NPI8 374 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 CMTM6Q9NX76 183 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 NDE1Q9NXR1 346 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 TMEM181Q9P2C4 612 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 KLHL9Q9P2J3 617 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 BAG5Q9UL15 447 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 CLEC4AQ9UMR7 237 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 PROCRQ9UNN8 238 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 TRAPPC4Q9Y296 219 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 SLC9A8Q9Y2E8 581 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms