RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 NPIPA1Q9UND3 350 aa12.04□□□□□ -0.48
BRAT1-205ENST00000473879 ORC6Q9Y5N6 252 aa12.04□□□□□ -0.48
BRAT1-205ENST00000473879 A0A0B4J2E0 115 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 TRBV4-1A0A0J9YWV2 114 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 A0A1B0GWA3 101 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 A0A1B0GX12 115 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 FAM47E-STBD1D6RA91 191 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 PDLIM1O00151 329 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 OIP5O43482 229 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 SNX4O95219 450 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 CCL3P10147 92 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 GP1BBP13224 206 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 ANXA8P13928 327 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 CNR1P21554 472 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 IFNGR2P38484 337 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 HSPA13P48723 471 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 IDH2P48735 452 aaKnown RBP12.03□□□□□ -0.48
BRAT1-205ENST00000473879 ALDH3A2P51648 485 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 PPP1R8Q12972 351 aaKnown RBP12.03□□□□□ -0.48
BRAT1-205ENST00000473879 ALG10BQ5I7T1 473 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 PRAMEF20Q5VT98 475 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 BICRALQ6AI39 1079 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 CBLN3Q6UW01 205 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 IZUMO2Q6UXV1 221 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 RRM2BQ7LG56 351 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 TMEM179BQ7Z7N9 219 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 PACS2Q86VP3 889 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 TSPYL5Q86VY4 417 aaPredicted RBP12.03□□□□□ -0.48
BRAT1-205ENST00000473879 GALNT4Q8N4A0 578 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 ATG16L2Q8NAA4 619 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 RNF217Q8TC41 542 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 DNAJC9Q8WXX5 260 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 TMEM234Q8WY98 164 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 MPP4Q96JB8 637 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 HS6ST2Q96MM7 605 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 PRR14Q9BWN1 585 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 ZNF556Q9HAH1 456 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 PROK2Q9HC23 129 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 MAN2C1Q9NTJ4 1040 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 DEPPQ9NTK1 212 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 ZNF835Q9Y2P0 537 aa12.03□□□□□ -0.48
BRAT1-205ENST00000473879 SH3PXD2BA1X283 911 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 OR10H3O60404 316 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 CDC40O60508 579 aaKnown RBP eCLIP12.02□□□□□ -0.49
BRAT1-205ENST00000473879 SLC19A2O60779 497 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 ADAM11O75078 769 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 PNMTP11086 282 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 ZNF26P17031 533 aaPredicted RBP12.02□□□□□ -0.49
BRAT1-205ENST00000473879 CDH2P19022 906 aaPredicted RBP12.02□□□□□ -0.49
BRAT1-205ENST00000473879 RBM34P42696 430 aaKnown RBP12.02□□□□□ -0.49
BRAT1-205ENST00000473879 SLC1A3P43003 542 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 CA7P43166 264 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 MASP1P48740 699 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 ZNF41P51814 821 aaPredicted RBP12.02□□□□□ -0.49
BRAT1-205ENST00000473879 RAD23AP54725 363 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 GPR85P60893 370 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 PPP2R2BQ00005 443 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 RFX4Q33E94 735 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 C1QL3Q5VWW1 255 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 PODNL1Q6PEZ8 512 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 ZNF730Q6ZMV8 503 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 Q6ZPB1 254 aaPredicted RBP12.02□□□□□ -0.49
BRAT1-205ENST00000473879 HS3ST5Q8IZT8 346 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 GHDCQ8N2G8 530 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 OR2M7Q8NG81 312 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 OR4K17Q8NGC6 315 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 SLC7A13Q8TCU3 470 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 MAGEE2Q8TD90 523 aaPredicted RBP12.02□□□□□ -0.49
BRAT1-205ENST00000473879 ACOT11Q8WXI4 607 aaPredicted RBP12.02□□□□□ -0.49
BRAT1-205ENST00000473879 TMEM41AQ96HV5 264 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 ZNF597Q96LX8 424 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 RDH12Q96NR8 316 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 ZNF184Q99676 751 aaPredicted RBP12.02□□□□□ -0.49
BRAT1-205ENST00000473879 FUZQ9BT04 418 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 TSPAN10Q9H1Z9 355 aaPredicted RBP12.02□□□□□ -0.49
BRAT1-205ENST00000473879 PTGES2Q9H7Z7 377 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 C12orf10Q9HB07 376 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 TAS2R10Q9NYW0 307 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 MGAT4BQ9UQ53 548 aa12.02□□□□□ -0.49
BRAT1-205ENST00000473879 EML6Q6ZMW3 1958 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 TRGV8A0A0C4DH27 118 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 TFECO14948 347 aaPredicted RBP12.01□□□□□ -0.49
BRAT1-205ENST00000473879 SNPHO15079 494 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 GLSO94925 669 aaPredicted RBP12.01□□□□□ -0.49
BRAT1-205ENST00000473879 ADAP00813 363 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 ALPLP05186 524 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 IGFBP5P24593 272 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 HTR3AP46098 478 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 UGT2B15P54855 530 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 AQP4P55087 323 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 CASP6P55212 293 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 FOXO1Q12778 655 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 FOXD4Q12950 439 aaPredicted RBP12.01□□□□□ -0.49
BRAT1-205ENST00000473879 LAPTM4AQ15012 233 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 QPRTQ15274 297 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 HYAL4Q2M3T9 481 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 FAHD1Q6P587 224 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 TBPL2Q6SJ96 375 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 FJX1Q86VR8 437 aa12.01□□□□□ -0.49
BRAT1-205ENST00000473879 PLCZ1Q86YW0 608 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms