RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 GTF3C1Q12789 2109 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 LCP2Q13094 533 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 FASTKD3Q14CZ7 662 aaKnown RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 EXOC3L2Q2M3D2 409 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 CT45A2Q5DJT8 189 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 FBXO48Q5FWF7 155 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 AGAP6Q5VW22 663 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 PPP4R4Q6NUP7 873 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 KLHL17Q6TDP4 642 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 CLEC2AQ6UVW9 174 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 DGAT2L6Q6ZPD8 337 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 Q71RC1 249 aaPredicted RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 MAVSQ7Z434 540 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 CMC1Q7Z7K0 106 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 P2RY8Q86VZ1 359 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 CCDC25Q86WR0 208 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 SLC22A9Q8IVM8 553 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 SLC44A2Q8IWA5 706 aaPredicted RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 PRR22Q8IZ63 422 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 CENPLQ8N0S6 344 aaPredicted RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 SLC43A2Q8N370 569 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 GTPBP8Q8N3Z3 284 aaPredicted RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 SPATA6LQ8N4H0 392 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 PTGR2Q8N8N7 351 aaPredicted RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 FADS6Q8N9I5 356 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 ZNF527Q8NB42 609 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 OR52B6Q8NGF0 335 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 FAM76AQ8TAV0 307 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 FNDC9Q8TBE3 224 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 RDH11Q8TC12 318 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 DCAKDQ8WVC6 231 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 RNF138Q8WVD3 245 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 SLC44A1Q8WWI5 657 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 HSD17B8Q92506 261 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 SLC9A6Q92581 669 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 ESAMQ96AP7 390 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 MUCL1Q96DR8 90 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 CCDC126Q96EE4 140 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 ZC3HAV1LQ96H79 300 aaKnown RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 LRGUKQ96M69 825 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 VSTM2LQ96N03 204 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 WFIKKN1Q96NZ8 548 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 BBS4Q96RK4 519 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 NODALQ96S42 347 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 ZNF382Q96SR6 550 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 SMR3AQ99954 134 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 TMEM204Q9BSN7 226 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 SORBS1Q9BX66 1292 aaKnown RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 MRPL1Q9BYD6 325 aaKnown RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 KLHL4Q9C0H6 718 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 ACTR6Q9GZN1 396 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 OPN3Q9H1Y3 402 aaPredicted RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 MYOZ1Q9NP98 299 aaPredicted RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 PLSCR4Q9NRQ2 329 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 TRMT1Q9NXH9 659 aaKnown RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 EMC3Q9P0I2 261 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 CPSF2Q9P2I0 782 aaKnown RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 KLHL9Q9P2J3 617 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 XPR1Q9UBH6 696 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 ZNF639Q9UID6 485 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 FBXL2Q9UKC9 423 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 PCTPQ9UKL6 214 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 MGAT4BQ9UQ53 548 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 LAMP3Q9UQV4 416 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 SNX24Q9Y343 169 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 RNF11Q9Y3C5 154 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 MAGED1Q9Y5V3 778 aaPredicted RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 SPIN1Q9Y657 262 aaPredicted RBP3.12□□□□□ -1.91
XRN1-209ENST00000472625 FKBP7Q9Y680 259 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 CUBNO60494 3623 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 DNAJC13O75165 2243 aa3.12□□□□□ -1.91
XRN1-209ENST00000472625 COL6A5A8TX70 2615 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 ZNF407Q9C0G0 2248 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 A0A1W2PQD3 144 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 OR2M5A3KFT3 312 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 A8MV72 311 aaPredicted RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 KDM4EB2RXH2 506 aaPredicted RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 H3BUI4 141 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 NDUFS8O00217 210 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 OR7A17O14581 309 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 ADAMDEC1O15204 470 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 CLOCKO15516 846 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 SCO2O43819 266 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 ZIC3O60481 467 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 TSPAN2O60636 221 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 CRCPO75575 148 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 ANGPTL1O95841 491 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 CGAP01215 116 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 GBAP04062 536 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 ERCC1P07992 297 aaPredicted RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 IL3P08700 152 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 RPS17P08708 135 aaKnown RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 NEFHP12036 1026 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 ATP6V1C1P21283 382 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 S1PR1P21453 382 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 FKBP2P26885 142 aaKnown RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 AGTR1P30556 359 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 SLC7A1P30825 629 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 TIA1P31483 386 aaKnown RBP eCLIP3.11□□□□□ -1.91
XRN1-209ENST00000472625 RPL3P39023 403 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms