RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 WFDC1Q9HC57 220 aa1.78□□□□□ -2.12
RBM39-228ENST00000471635 DMAP1Q9NPF5 467 aaPredicted RBP1.78□□□□□ -2.12
RBM39-228ENST00000471635 TRAPPC4Q9Y296 219 aa1.78□□□□□ -2.12
RBM39-228ENST00000471635 KNSTRNQ9Y448 316 aa1.78□□□□□ -2.12
RBM39-228ENST00000471635 UBE4BO95155 1302 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 CTDNEP1O95476 244 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 MT-ND3P03897 115 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 RNASE2P10153 161 aaKnown RBP1.77□□□□□ -2.13
RBM39-228ENST00000471635 RALAP11233 206 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 ICAM2P13598 275 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 UQCRBP14927 111 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 STARD6P59095 220 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 PDIA5Q14554 519 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 ADPRMQ3LIE5 342 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 CCDC40Q4G0X9 1142 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 GDPD3Q7L5L3 318 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 ELMOD2Q8IZ81 293 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 FAM9BQ8IZU0 186 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 RNF148Q8N7C7 305 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 NPBQ8NG41 125 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 FANK1Q8TC84 345 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 ACER1Q8TDN7 264 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 NCLNQ969V3 563 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 TIMD4Q96H15 378 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 NSMCE2Q96MF7 247 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 ATG10Q9H0Y0 220 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 CDC42EP4Q9H3Q1 356 aaKnown RBP1.77□□□□□ -2.13
RBM39-228ENST00000471635 TMEM231Q9H6L2 316 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 LPAR2Q9HBW0 351 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 SLC25A37Q9NYZ2 338 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 SPASTQ9UBP0 616 aa1.77□□□□□ -2.13
RBM39-228ENST00000471635 WARS2Q9UGM6 360 aaKnown RBP1.77□□□□□ -2.13
RBM39-228ENST00000471635 LGALS8O00214 317 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 HCRTR1O43613 425 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 ANGPTL7O43827 346 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 SS18L1O75177 396 aaPredicted RBP1.76□□□□□ -2.13
RBM39-228ENST00000471635 BAG2O95816 211 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 IGKV1D-16P01601 117 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 ETS1P14921 441 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 ATP6V1B2P21281 511 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 BDKRB1P46663 353 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 KLK7P49862 253 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 BIDP55957 195 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 GABPB1Q06547 395 aaPredicted RBP1.76□□□□□ -2.13
RBM39-228ENST00000471635 CUL1Q13616 776 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 GAMTQ14353 236 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 C1orf100Q5SVJ3 147 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 Q6ZR03 302 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 ACOT7LQ6ZUV0 252 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 CAMK2N1Q7Z7J9 78 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 OR51S1Q8NGJ8 323 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 ZNF430Q9H8G1 570 aaPredicted RBP1.76□□□□□ -2.13
RBM39-228ENST00000471635 POLD4Q9HCU8 107 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 SIRT7Q9NRC8 400 aa1.76□□□□□ -2.13
RBM39-228ENST00000471635 MRPL39Q9NYK5 338 aaKnown RBP1.76□□□□□ -2.13
RBM39-228ENST00000471635 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.76□□□□□ -2.13
RBM39-228ENST00000471635 A0A1B0GUL7 405 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 ZNF233A6NK53 670 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 E9PBE3 544 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 BET1O15155 118 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 B4GALT5O43286 388 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 JAK2O60674 1132 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 GNA14O95837 355 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 MT-ATP6P00846 226 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 TGFAP01135 160 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 RBMY1CP0DJD4 496 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 CCDC192P0DO97 292 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 CLUP10909 449 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 FUT1P19526 365 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 SLC26A5P58743 744 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 LDLRAP1Q5SW96 308 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 CALHM3Q86XJ0 350 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 FAM71CQ8NEG0 241 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 OR56B1Q8NGI3 324 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 ARPC1AQ92747 370 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 MRPL38Q96DV4 380 aaKnown RBP1.75□□□□□ -2.13
RBM39-228ENST00000471635 SAMD8Q96LT4 415 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 TMEM237Q96Q45 408 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 RSPH9Q9H1X1 276 aaPredicted RBP1.75□□□□□ -2.13
RBM39-228ENST00000471635 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.75□□□□□ -2.13
RBM39-228ENST00000471635 MOSPD1Q9UJG1 213 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 OARD1Q9Y530 152 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 CUX2O14529 1486 aa1.75□□□□□ -2.13
RBM39-228ENST00000471635 SHROOM3Q8TF72 1996 aa1.74□□□□□ -2.13
RBM39-228ENST00000471635 ABCC4O15439 1325 aa1.74□□□□□ -2.13
RBM39-228ENST00000471635 NLRC5Q86WI3 1866 aa1.74□□□□□ -2.13
RBM39-228ENST00000471635 A0A0G2JLM5 398 aa1.74□□□□□ -2.13
RBM39-228ENST00000471635 ANKRD30BLA7E2S9 258 aa1.74□□□□□ -2.13
RBM39-228ENST00000471635 DUX1O43812 170 aa1.74□□□□□ -2.13
RBM39-228ENST00000471635 MUC1P15941 1255 aaPredicted RBP1.74□□□□□ -2.13
RBM39-228ENST00000471635 CALB2P22676 271 aa1.74□□□□□ -2.13
RBM39-228ENST00000471635 CYLC1P35663 651 aaPredicted RBP1.74□□□□□ -2.13
RBM39-228ENST00000471635 MAGEA5P43359 124 aa1.74□□□□□ -2.13
RBM39-228ENST00000471635 RABIFP47224 123 aa1.74□□□□□ -2.13
RBM39-228ENST00000471635 ATXN3P54252 364 aaPredicted RBP1.74□□□□□ -2.13
RBM39-228ENST00000471635 ARL6IP1Q15041 203 aa1.74□□□□□ -2.13
RBM39-228ENST00000471635 CTRB2Q6GPI1 263 aa1.74□□□□□ -2.13
RBM39-228ENST00000471635 RAB12Q6IQ22 244 aa1.74□□□□□ -2.13
RBM39-228ENST00000471635 ACSM5Q6NUN0 579 aa1.74□□□□□ -2.13
RBM39-228ENST00000471635 FAHD2BQ6P2I3 314 aaPredicted RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms