RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 GABRQQ9UN88 632 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 MST1RQ04912 1400 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 CD163L1Q9NR16 1453 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 PPP1R2P9O14990 202 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 KCNK2O95069 426 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 AK1P00568 194 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 AHSGP02765 367 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 TP53P04637 393 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 TNFRSF1BP20333 461 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 HTR5AP47898 357 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 PRPS1P60891 318 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 TBPL1P62380 186 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 TGFBR3Q03167 851 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 DSC1Q08554 894 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 EDDM3AQ14507 147 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 HMGN3Q15651 99 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF468Q5VIY5 522 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 RTL6Q6ICC9 239 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 OR8G2PQ6IF36 304 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ALKAL2Q6UX46 152 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 LACC1Q8IV20 430 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF454Q8N9F8 522 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 OR7G3Q8NG95 312 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ARRDC3Q96B67 414 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 SAP130Q9H0E3 1048 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 WASH6PQ9NQA3 447 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 FAM212BQ9NTI7 297 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-210ENST00000471181 ACOXLQ9NUZ1 547 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 OBP2AQ9NY56 170 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 CNIH4Q9P003 139 aa6.48□□□□□ -1.37
BRCA1-210ENST00000471181 GPR25O00155 361 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 TGFB1I1O43294 461 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 PRAF2O60831 178 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 HPRP00739 348 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 FABP1P07148 127 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 SULT1A3P0DMM9 295 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 SULT1A4P0DMN0 295 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 PTGIRP43119 386 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 TAS2R46P59540 309 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 CAMK2BQ13554 666 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF684Q5T5D7 378 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 BTNL8Q6UX41 500 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 SERPINA11Q86U17 422 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 ZUFSPQ96AP4 578 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 BTF3L4Q96K17 158 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 NDFIP1Q9BT67 221 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 STARD5Q9NSY2 213 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 CCM2LQ9NUG4 571 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-210ENST00000471181 C1orf123Q9NWV4 160 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 PIK3C2AO00443 1686 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 PTPRUQ92729 1446 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 ANTXRLA6NF34 631 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 DBX1A6NMT0 343 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 GAPDHSO14556 408 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-210ENST00000471181 CFHP08603 1231 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 RD3LP0DJH9 198 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 SPP1P10451 314 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 KCNE1P15382 129 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 GIFP27352 417 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF33BQ06732 778 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 MS4A13Q5J8X5 152 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 APOBEC3HQ6NTF7 200 aaKnown RBP6.47□□□□□ -1.37
BRCA1-210ENST00000471181 ABHD15Q6UXT9 468 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF662Q6ZS27 426 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 DBF4BQ8NFT6 615 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 PCNPQ8WW12 178 aaKnown RBP6.47□□□□□ -1.37
BRCA1-210ENST00000471181 BRI3BPQ8WY22 251 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 C14orf79Q96F83 325 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 SLC2A13Q96QE2 648 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 OR7D2Q96RA2 312 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 HES7Q9BYE0 225 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 AGXT2Q9BYV1 514 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 CPEB1Q9BZB8 566 aaKnown RBP6.47□□□□□ -1.37
BRCA1-210ENST00000471181 TPSD1Q9BZJ3 242 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 HEYLQ9NQ87 328 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-210ENST00000471181 RNF150Q9ULK6 438 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 SPATA31A6Q5VVP1 1343 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 C17orf105B2RV13 164 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 MCRIP1C9JLW8 97 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 SCAMP2O15127 329 aaKnown RBP6.47□□□□□ -1.37
BRCA1-210ENST00000471181 POU2F2P09086 479 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 OR5H8P0DN80 308 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 CPN1P15169 458 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 AREGP15514 252 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 SMPD1P17405 629 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 HTR1EP28566 365 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF90Q03938 601 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 IL17AQ16552 155 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 MICAQ29983 383 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 HSD17B13Q7Z5P4 300 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-210ENST00000471181 SLC5A8Q8N695 610 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 GDPD1Q8N9F7 314 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 AMDHD1Q96NU7 426 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 CHST11Q9NPF2 352 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 THSD1Q9NS62 852 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 RYDENQ9NUL5 291 aaKnown RBP6.47□□□□□ -1.37
BRCA1-210ENST00000471181 MED9Q9NWA0 146 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 OR6C68A6NDL8 312 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 C4orf47A7E2U8 309 aa6.47□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF732B4DXR9 585 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms