RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 GMNNO75496 209 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 TOXO94900 526 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 TGM6O95932 706 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 RNF224P0DH78 156 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 NCK1P16333 377 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 CXCR1P25024 350 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 SLC7A1P30825 629 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 CLK1P49759 484 aaKnown RBP10.73□□□□□ -0.69
VPS13D-204ENST00000469054 CARD18P57730 90 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 CEACAM7Q14002 265 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 PON3Q15166 354 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 OR1Q1Q15612 314 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 SYT14P1Q58G82 188 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 RIPPLY2Q5TAB7 128 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 TMPPEQ6ZT21 453 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 MRGPRGQ86SM5 289 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 ATG4DQ86TL0 474 aaPredicted RBP10.73□□□□□ -0.69
VPS13D-204ENST00000469054 RANBP3LQ86VV4 465 aaPredicted RBP10.73□□□□□ -0.69
VPS13D-204ENST00000469054 CARM1Q86X55 608 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 RBM45Q8IUH3 476 aaKnown RBP10.73□□□□□ -0.69
VPS13D-204ENST00000469054 OR4D11Q8NGI4 311 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 OR10Q1Q8NGQ4 319 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 MBD3L2Q8NHZ7 208 aaPredicted RBP10.73□□□□□ -0.69
VPS13D-204ENST00000469054 VANGL1Q8TAA9 524 aaPredicted RBP10.73□□□□□ -0.69
VPS13D-204ENST00000469054 DNAJA4Q8WW22 397 aaPredicted RBP10.73□□□□□ -0.69
VPS13D-204ENST00000469054 LZICQ8WZA0 190 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 WNT2BQ93097 391 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 FAM162AQ96A26 154 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 C3orf49Q96BT1 292 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 TPD52L3Q96J77 140 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 MCHR1Q99705 422 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 COQ10BQ9H8M1 238 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 GORASP2Q9H8Y8 452 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 C12orf10Q9HB07 376 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 ADPRHL2Q9NX46 363 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 RPS6KB2Q9UBS0 482 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 SH3GLB1Q9Y371 365 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 ZNF175Q9Y473 711 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 FREM3P0C091 2139 aa10.73□□□□□ -0.69
VPS13D-204ENST00000469054 FASNP49327 2511 aaKnown RBP10.73□□□□□ -0.69
VPS13D-204ENST00000469054 A0A0G2JNJ9 132 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 A0A1B0GWA3 101 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 A0A1W2PNR3 127 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 SLC22A20A6NK97 555 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 CXCL13O43927 109 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 SERPINA1P01009 418 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 IL2RAP01589 272 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 TFPIP10646 304 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 AGAP20933 346 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 CEACAM8P31997 349 aaPredicted RBP10.72□□□□□ -0.69
VPS13D-204ENST00000469054 MSX2P35548 267 aaPredicted RBP10.72□□□□□ -0.69
VPS13D-204ENST00000469054 RAC3P60763 192 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 CBX1P83916 185 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 BNIP1Q12981 228 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 NPTX1Q15818 432 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 ALG10BQ5I7T1 473 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 ULK3Q6PHR2 472 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 XKRXQ6PP77 449 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 C6orf89Q6UWU4 347 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 PLXDC2Q6UX71 529 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 P4HA3Q7Z4N8 544 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 ZNF808Q8N4W9 903 aaPredicted RBP10.72□□□□□ -0.69
VPS13D-204ENST00000469054 C9orf106Q8NAJ2 232 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 FNDC9Q8TBE3 224 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 ITLN2Q8WWU7 325 aaPredicted RBP10.72□□□□□ -0.69
VPS13D-204ENST00000469054 CPNE4Q96A23 557 aaPredicted RBP10.72□□□□□ -0.69
VPS13D-204ENST00000469054 SDCCAG3Q96C92 435 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 DDIT4LQ96D03 193 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 ARL5BQ96KC2 179 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 OR5B2Q96R09 309 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 TM9SF2Q99805 663 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 PCDHAC1Q9H158 963 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 TIGARQ9NQ88 270 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 COQ3Q9NZJ6 369 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 Q9UFV3 132 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 MAGEL2Q9UJ55 1249 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 MCTS1Q9ULC4 181 aaKnown RBP10.72□□□□□ -0.69
VPS13D-204ENST00000469054 PRPF19Q9UMS4 504 aaKnown RBP10.72□□□□□ -0.69
VPS13D-204ENST00000469054 HDGFL3Q9Y3E1 203 aa10.72□□□□□ -0.69
VPS13D-204ENST00000469054 PRRC2CQ9Y520 2896 aaKnown RBP10.71□□□□□ -0.69
VPS13D-204ENST00000469054 A0A0B4J2E0 115 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 A0A1B0GX12 115 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 ZC3H12DA2A288 527 aaKnown RBP10.71□□□□□ -0.69
VPS13D-204ENST00000469054 HSPB2A8KAH6 182 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 GYG2O15488 501 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 RCBTB2O95199 551 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 SYNGR4O95473 234 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 ZNF682O95780 498 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 PNMTP11086 282 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 TNFRSF1BP20333 461 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 OR1E2P47887 323 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 BNIP2Q12982 314 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 MYBPHQ13203 477 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 HSPB2Q16082 182 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 DNAL1Q4LDG9 190 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 ENTPD8Q5MY95 495 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 ZNF613Q6PF04 617 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 VTCN1Q7Z7D3 282 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 HEATR5AQ86XA9 2040 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 CCDC71Q8IV32 467 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms