RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 KCNK5O95279 499 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 AIFM1O95831 613 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 CD8AP01732 235 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 VTNP04004 478 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 CD1AP06126 327 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SYPP08247 313 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 CLTBP09497 229 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 RAB40ALP0C0E4 278 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 CD79AP11912 226 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 TPT1P13693 172 aaKnown RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ELK1P19419 428 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 RAB5AP20339 215 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 FGF7P21781 194 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 PBLDP30039 288 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 CNR2P34972 360 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 CD86P42081 329 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 MAGEB1P43366 347 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 AVPR1BP47901 424 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 LIMS1P48059 325 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SMSP52788 366 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 FOXA1P55317 472 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ZP1P60852 638 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 RAP1BP61224 184 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 RPS14P62263 151 aaKnown RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 PPIAP62937 165 aaKnown RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 HTRA4P83105 476 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SRSF3P84103 164 aaKnown RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ELAVL2Q12926 359 aaKnown RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SLC14A1Q13336 389 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 NAE1Q13564 534 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 KLF9Q13886 244 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 PTPRCAPQ14761 206 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 IRF4Q15306 451 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF630Q2M218 657 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 PTCHD3Q3KNS1 767 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 RAB6CQ53S08 254 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 TMEM177Q53S58 311 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 VWA2Q5GFL6 755 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 TMEM255AQ5JRV8 349 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 FAM74A1Q5RGS3 127 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 OTUD1Q5VV17 481 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 LIPNQ5VXI9 398 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 NSUN5P2Q63ZY6 315 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 TRNP1Q6NT89 227 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ARMC6Q6NXE6 501 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 MED27Q6P2C8 311 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 PGBD2Q6P3X8 592 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 DOK6Q6PKX4 331 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SLC22A25Q6T423 547 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 DLK2Q6UY11 383 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SLC36A4Q6YBV0 504 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF852Q6ZMS4 543 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ASB18Q6ZVZ8 466 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ARMCX2Q7L311 632 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 TRMT1LQ7Z2T5 733 aaKnown RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SMIM15Q7Z3B0 74 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 MILR1Q7Z6M3 343 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 LRRTM4Q86VH4 590 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 MARCH9Q86YJ5 346 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 GID4Q8IVV7 300 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SIAH3Q8IW03 269 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 MSRB3Q8IXL7 192 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 GPR65Q8IYL9 337 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 GTPBP8Q8N3Z3 284 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 HDDC3Q8N4P3 179 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ARRDC1Q8N5I2 433 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ARIH2OSQ8N7S6 290 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SDR9C7Q8NEX9 313 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 OR8J2Q8NGG1 315 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 OR1J1Q8NGS3 322 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 OR2G2Q8NGZ5 317 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 IL31RAQ8NI17 732 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 PIGXQ8TBF5 258 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 M1APQ8TC57 530 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 HAVCR2Q8TDQ0 301 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 RAB40AQ8WXH6 277 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SORCS1Q8WY21 1168 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ING5Q8WYH8 240 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 PIGBQ92521 554 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 TADA1Q96BN2 335 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ECHDC3Q96DC8 303 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 MTFMTQ96DP5 389 aaKnown RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 MRPL38Q96DV4 380 aaKnown RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 MOCOSQ96EN8 888 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 CMTM7Q96FZ5 175 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 MED8Q96G25 268 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 TCTN2Q96GX1 697 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SLC41A3Q96GZ6 507 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 RPL10LQ96L21 214 aaKnown RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 C20orf173Q96LM9 149 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 MS4A4EQ96PG1 132 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 FCRL4Q96PJ5 515 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 PANX1Q96RD7 426 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 PARK7Q99497 189 aaKnown RBP4.5□□□□□ -1.69
SF3B1-207ENST00000468925 C19orf43Q9BQ61 176 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 FUZQ9BT04 418 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 G6PC3Q9BUM1 346 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF426Q9BUY5 554 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 NTMT1Q9BV86 223 aa4.5□□□□□ -1.69
SF3B1-207ENST00000468925 SORBS1Q9BX66 1292 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms