RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 SEC13P55735 322 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 TNFRSF17Q02223 184 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 LRRN1Q6UXK5 716 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 ZNF793Q6ZN11 406 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 SMPDL3AQ92484 453 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 OR2A7Q96R45 310 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 FAIM2Q9BWQ8 316 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 SYNPO2LQ9H987 977 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 SLC22A11Q9NSA0 550 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 DENND4AQ7Z401 1863 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 OR2M5A3KFT3 312 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 LRRN3E7EW58 273 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 C1QTNF3-AMACRE9PGA6 284 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 PGRMC2O15173 223 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 NDUFS4O43181 175 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 PRODHO43272 600 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 UBL3O95164 117 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 GJA4P35212 333 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 VEGFCP49767 419 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 VASPP50552 380 aaPredicted RBP16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 ZNF124Q15973 351 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 FAM69AQ5T7M9 428 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 OR5M10Q6IEU7 315 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 PSRC1Q6PGN9 363 aaPredicted RBP16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 SLC30A8Q8IWU4 369 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 HDDC3Q8N4P3 179 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 ZNF485Q8NCK3 441 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 OR10K1Q8NGX5 313 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 APOBEC4Q8WW27 367 aaKnown RBP16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 OR5P2Q8WZ92 322 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 PLA2G2FQ9BZM2 168 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 LRRN3Q9H3W5 708 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 EXOSC3Q9NQT5 275 aaKnown RBP16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 SDHAF3Q9NRP4 125 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 NTMQ9P121 344 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 PTGFRNQ9P2B2 879 aa16.73■□□□□ 0.27
SNAPC3-205ENST00000467062 NARSO43776 548 aaKnown RBP16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 KAT7O95251 611 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 SSR2P43308 183 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 MTNR1AP48039 350 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 STARP49675 285 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 PCBP4P57723 403 aaKnown RBP16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 CSNK1G2P78368 415 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 ACSM1Q08AH1 577 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 INSL4Q14641 139 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 RNASE12Q5GAN4 147 aaKnown RBP16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 AGBL4Q5VU57 503 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 SLC7A13Q8TCU3 470 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 C2CD4CQ8TF44 421 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 ORAI1Q96D31 301 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 RHBGQ9H310 441 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 GLIPR2Q9H4G4 154 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 MIOXQ9UGB7 285 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 RASD1Q9Y272 281 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 SLC22A7Q9Y694 548 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 RAD1O60671 282 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 CDC123O75794 336 aaPredicted RBP16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 RGS9O75916 674 aaPredicted RBP16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 ANKRD34CP0C6C1 535 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 IFNGR1P15260 489 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 DGCR2P98153 550 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 DUSP2Q05923 314 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 DHRS7BQ6IAN0 325 aaPredicted RBP16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 NR2C2APQ86WQ0 139 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 LDLRAD3Q86YD5 345 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 OR6V1Q8N148 313 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 GANCQ8TET4 914 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 FCRL4Q96PJ5 515 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 TRMT61BQ9BVS5 477 aaKnown RBP16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 OR51I1Q9H343 314 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 MKL2Q9ULH7 1088 aa16.72■□□□□ 0.27
SNAPC3-205ENST00000467062 HEATR5BQ9P2D3 2071 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 GATBO75879 557 aaKnown RBP16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 WNT1P04628 370 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 PTAFRP25105 342 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 ELAVL4P26378 380 aaKnown RBP16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 SLC1A3P43003 542 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 SNTB1Q13884 538 aaKnown RBP16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 KLF9Q13886 244 aaPredicted RBP16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 KRT33BQ14525 404 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 GINS1Q14691 196 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 SLC30A6Q6NXT4 461 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 UQCC3Q6UW78 93 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 VITQ6UXI7 678 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 ADAMTSL4Q6UY14 1074 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 SLC36A4Q6YBV0 504 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 LHFPL3Q86UP9 236 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 NUDT13Q86X67 352 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 CCDC116Q8IYX3 515 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 TCEAL7Q9BRU2 100 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 NANSQ9NR45 359 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 CA10Q9NS85 328 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 ZCCHC3Q9NUD5 404 aaKnown RBP16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 FBXW2Q9UKT8 454 aa16.71■□□□□ 0.27
SNAPC3-205ENST00000467062 SELLP14151 372 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 ZNF3P17036 446 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 PSMB1P20618 241 aaKnown RBP16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 MAPK3P27361 379 aaPredicted RBP16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 THBS2P35442 1172 aa16.71■□□□□ 0.26
SNAPC3-205ENST00000467062 CD79BP40259 229 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms