RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 KCNJ5P48544 419 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 POLR2HP52434 150 aaKnown RBP10.44□□□□□ -0.74
CUX1-207ENST00000465461 DLX5P56178 289 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 COPZ1P61923 177 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 SLC25A3Q00325 362 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 SYT14P1Q58G82 188 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 PDSS1Q5T2R2 415 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 WBP2NLQ6ICG8 309 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 C3orf33Q6P1S2 294 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 VWA1Q6PCB0 445 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 HACD2Q6Y1H2 254 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 CCDC80Q76M96 950 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 PATL1Q86TB9 770 aaKnown RBP10.44□□□□□ -0.74
CUX1-207ENST00000465461 MICU2Q8IYU8 434 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 RNF148Q8N7C7 305 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 CNEP1R1Q8N9A8 125 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 OR2T12Q8NG77 320 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 HOPXQ9BPY8 73 aaPredicted RBP10.44□□□□□ -0.74
CUX1-207ENST00000465461 ADAM19Q9H013 955 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 RNF122Q9H9V4 155 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 KCNJ16Q9NPI9 418 aa10.44□□□□□ -0.74
CUX1-207ENST00000465461 A0A1W2PNV4 684 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 ELOVL7A1L3X0 281 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 PRORSD1PA6NEY8 169 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 TNFSF13O75888 250 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 UQCRBP14927 111 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 CXCR1P25024 350 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 GSK3BP49841 420 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 DIO1P49895 249 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 RGS8P57771 180 aaPredicted RBP10.43□□□□□ -0.74
CUX1-207ENST00000465461 TFF3Q07654 80 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 MYBPHQ13203 477 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 NPTX1Q15818 432 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 ZNF239Q16600 458 aaKnown RBP10.43□□□□□ -0.74
CUX1-207ENST00000465461 ZSWIM7Q19AV6 140 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 LRRC23Q53EV4 343 aaPredicted RBP10.43□□□□□ -0.74
CUX1-207ENST00000465461 INTS11Q5TA45 600 aaKnown RBP10.43□□□□□ -0.74
CUX1-207ENST00000465461 ERICH5Q6P6B1 374 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 LUZP2Q86TE4 346 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 P3H2Q8IVL5 708 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 SLC30A8Q8IWU4 369 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 FAM156AQ8NDB6 213 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 OR52E4Q8NGH9 312 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 OR6T1Q8NGN1 323 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 RNF217Q8TC41 542 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 BCAS4Q8TDM0 211 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 ABHD3Q8WU67 409 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 C3orf49Q96BT1 292 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 ZNF775Q96BV0 537 aaPredicted RBP10.43□□□□□ -0.74
CUX1-207ENST00000465461 ARHGDIGQ99819 225 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 NPDC1Q9NQX5 325 aaPredicted RBP10.43□□□□□ -0.74
CUX1-207ENST00000465461 ADA2Q9NZK5 511 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 SLC13A4Q9UKG4 626 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 MCTS1Q9ULC4 181 aaKnown RBP10.43□□□□□ -0.74
CUX1-207ENST00000465461 ZNF175Q9Y473 711 aa10.43□□□□□ -0.74
CUX1-207ENST00000465461 A0A1B0GWA3 101 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 CYSRT1A8MQ03 144 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 TMEM229AB2RXF0 380 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 ZNF814B7Z6K7 855 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 EEF1E1-BLOC1S5C9J1V9 151 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 SULT2B1O00204 365 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 NDUFAB1O14561 156 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 DVL2O14641 736 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 SMAD9O15198 467 aaKnown RBP10.42□□□□□ -0.74
CUX1-207ENST00000465461 GSTA4O15217 222 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 EEF1E1O43324 174 aaKnown RBP10.42□□□□□ -0.74
CUX1-207ENST00000465461 SMNDC1O75940 238 aaKnown RBP eCLIP10.42□□□□□ -0.74
CUX1-207ENST00000465461 LGI1O95970 557 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 FESP07332 822 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 IMPDH2P12268 514 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 TCN1P20061 433 aaPredicted RBP10.42□□□□□ -0.74
CUX1-207ENST00000465461 KDELR2P33947 212 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 OPRM1P35372 400 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 MSX2P35548 267 aaPredicted RBP10.42□□□□□ -0.74
CUX1-207ENST00000465461 KIR2DL2P43627 348 aaPredicted RBP10.42□□□□□ -0.74
CUX1-207ENST00000465461 HTR3AP46098 478 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 OR1E2P47887 323 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 OR2B6P58173 313 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 MXRA7P84157 204 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 FOXD4Q12950 439 aaPredicted RBP10.42□□□□□ -0.74
CUX1-207ENST00000465461 VEZF1Q14119 521 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 OR1Q1Q15612 314 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 TMPPEQ6ZT21 453 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 FCRLAQ7L513 359 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 BTLAQ7Z6A9 289 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 ARPINQ7Z6K5 226 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 ATG4DQ86TL0 474 aaPredicted RBP10.42□□□□□ -0.74
CUX1-207ENST00000465461 TSPYL5Q86VY4 417 aaPredicted RBP10.42□□□□□ -0.74
CUX1-207ENST00000465461 STARD4Q96DR4 205 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 MCHR1Q99705 422 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 OPN3Q9H1Y3 402 aaPredicted RBP10.42□□□□□ -0.74
CUX1-207ENST00000465461 ALG2Q9H553 416 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 PAQR5Q9NXK6 330 aaPredicted RBP10.42□□□□□ -0.74
CUX1-207ENST00000465461 KLHL28Q9NXS3 571 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 TMEM181Q9P2C4 612 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 RPS6KB2Q9UBS0 482 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 ZNF629Q9UEG4 869 aaPredicted RBP10.42□□□□□ -0.74
CUX1-207ENST00000465461 EGFL7Q9UHF1 273 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 SH3GLB1Q9Y371 365 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 KLF2Q9Y5W3 355 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms