RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 INSL6Q9Y581 213 aa17.03■□□□□ 0.32
HPS3-204ENST00000462030 ARPC1BO15143 372 aaKnown RBP17.02■□□□□ 0.32
HPS3-204ENST00000462030 OGG1O15527 345 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 DNAJB6O75190 326 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 PCDH8O95206 1070 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 ADH1CP00326 375 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 SERPINA3P01011 423 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 UCHL1P09936 223 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 LINC00271P0C7V0 271 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 ZNF888P0CJ79 500 aaPredicted RBP17.02■□□□□ 0.32
HPS3-204ENST00000462030 LAMP2P13473 410 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 VIPR2P41587 438 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 ACTC1P68032 377 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 ACTA1P68133 377 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 ID2Q02363 134 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 AMZ1Q400G9 498 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 HES5Q5TA89 166 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 RPL13AP3Q6NVV1 102 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 BAIAP2L2Q6UXY1 529 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 PRSS42Q7Z5A4 293 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 CDK20Q8IZL9 346 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 ZNF619Q8N2I2 560 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 OR52I2Q8NH67 350 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 CA10Q9NS85 328 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 HCN3Q9P1Z3 774 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 MED31Q9Y3C7 131 aa17.02■□□□□ 0.32
HPS3-204ENST00000462030 TBC1D3EA0A087X179 549 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 TRIM77I1YAP6 450 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 PTP4A3O75365 173 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 ARL6IP5O75915 188 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 RGS11O94810 467 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 TGM6O95932 706 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 AGR2O95994 175 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 ACSM4P0C7M7 580 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 PSMB1P20618 241 aaKnown RBP17.02■□□□□ 0.31
HPS3-204ENST00000462030 NAA10P41227 235 aaPredicted RBP17.02■□□□□ 0.31
HPS3-204ENST00000462030 RAD52P43351 418 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 PLAURQ03405 335 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 SERPINA12Q8IW75 414 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 SHISA5Q8N114 240 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 UXS1Q8NBZ7 420 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 WDR89Q96FK6 387 aaPredicted RBP17.02■□□□□ 0.31
HPS3-204ENST00000462030 TNFRSF13CQ96RJ3 184 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 ARPC5LQ9BPX5 153 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 TEX101Q9BY14 249 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 ADAP2Q9NPF8 381 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 TMEM74BQ9NUR3 256 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 ANKRD10Q9NXR5 420 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 HAO2Q9NYQ3 351 aa17.02■□□□□ 0.31
HPS3-204ENST00000462030 MID1O15344 667 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 NID1P14543 1247 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 ATF4P18848 351 aaPredicted RBP17.01■□□□□ 0.31
HPS3-204ENST00000462030 CXCL2P19875 107 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 RPS4Y1P22090 263 aaKnown RBP17.01■□□□□ 0.31
HPS3-204ENST00000462030 TSFMP43897 325 aaKnown RBP17.01■□□□□ 0.31
HPS3-204ENST00000462030 DCST2Q5T1A1 773 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 FAAP20Q6NZ36 180 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 FAM199XQ6PEV8 388 aaPredicted RBP17.01■□□□□ 0.31
HPS3-204ENST00000462030 SLC39A5Q6ZMH5 540 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 VN1R4Q7Z5H5 301 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 UBE2Q1Q7Z7E8 422 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 SFXN2Q96NB2 322 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 GFI1Q99684 422 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 SLC25A18Q9H1K4 315 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 NPDC1Q9NQX5 325 aaPredicted RBP17.01■□□□□ 0.31
HPS3-204ENST00000462030 EMC3Q9P0I2 261 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 PIPOXQ9P0Z9 390 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 MGAT4CQ9UBM8 478 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 ATP1B1P05026 303 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 MAP2K6P52564 334 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 TNFRSF17Q02223 184 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 FAM69AQ5T7M9 428 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 SLC25A25Q6KCM7 469 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 FIGNL1Q6PIW4 674 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 GRAMD2AQ8IUY3 354 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 SDR9C7Q8NEX9 313 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 SLC25A38Q96DW6 304 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 ELMOD3Q96FG2 381 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 RAB11FIP5Q9BXF6 653 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 NRIP3Q9NQ35 241 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 ZNF275Q9NSD4 429 aaPredicted RBP17.01■□□□□ 0.31
HPS3-204ENST00000462030 KLK11Q9UBX7 282 aa17.01■□□□□ 0.31
HPS3-204ENST00000462030 A0A0C4DFX4 3053 aa17■□□□□ 0.31
HPS3-204ENST00000462030 PTPRSQ13332 1948 aa17■□□□□ 0.31
HPS3-204ENST00000462030 hCG_1807616A0A1W2PRN6 198 aa17■□□□□ 0.31
HPS3-204ENST00000462030 C1QTNF3-AMACRE9PGA6 284 aa17■□□□□ 0.31
HPS3-204ENST00000462030 DBIP07108 87 aaKnown RBP17■□□□□ 0.31
HPS3-204ENST00000462030 HOXD4P09016 255 aaPredicted RBP17■□□□□ 0.31
HPS3-204ENST00000462030 PTHLHP12272 177 aa17■□□□□ 0.31
HPS3-204ENST00000462030 NAT1P18440 290 aa17■□□□□ 0.31
HPS3-204ENST00000462030 DRD3P35462 400 aa17■□□□□ 0.31
HPS3-204ENST00000462030 PSMB10P40306 273 aa17■□□□□ 0.31
HPS3-204ENST00000462030 EPHA4P54764 986 aa17■□□□□ 0.31
HPS3-204ENST00000462030 IRF4Q15306 451 aa17■□□□□ 0.31
HPS3-204ENST00000462030 GAB4Q2WGN9 574 aa17■□□□□ 0.31
HPS3-204ENST00000462030 NHLRC3Q5JS37 347 aa17■□□□□ 0.31
HPS3-204ENST00000462030 ZNF425Q6IV72 752 aa17■□□□□ 0.31
HPS3-204ENST00000462030 KIAA1324Q6UXG2 1013 aaKnown RBP17■□□□□ 0.31
HPS3-204ENST00000462030 OVCH1Q7RTY7 1134 aa17■□□□□ 0.31
HPS3-204ENST00000462030 ZCCHC10Q8TBK6 192 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms