RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 ART1P52961 327 aa15.63■□□□□ 0.09
SCARNA2-201ENST00000458748 GTDC1Q4AE62 458 aa15.63■□□□□ 0.09
SCARNA2-201ENST00000458748 RNF220Q5VTB9 566 aa15.63■□□□□ 0.09
SCARNA2-201ENST00000458748 KRT73Q86Y46 540 aa15.63■□□□□ 0.09
SCARNA2-201ENST00000458748 TMEM19Q96HH6 336 aa15.63■□□□□ 0.09
SCARNA2-201ENST00000458748 SPATA5L1Q9BVQ7 753 aa15.63■□□□□ 0.09
SCARNA2-201ENST00000458748 BCL2L10Q9HD36 194 aa15.63■□□□□ 0.09
SCARNA2-201ENST00000458748 CTPS2Q9NRF8 586 aa15.63■□□□□ 0.09
SCARNA2-201ENST00000458748 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.63■□□□□ 0.09
SCARNA2-201ENST00000458748 ZNF443Q9Y2A4 671 aaPredicted RBP15.63■□□□□ 0.09
SCARNA2-201ENST00000458748 MTORP42345 2549 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 PMS2P2O95744 297 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 BMP2P12643 396 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 DNASE1P24855 282 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 IST1P53990 364 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 RASGEF1BQ0VAM2 473 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 EPS8Q12929 822 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 GCNT6Q5T4J0 391 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 TUSC5Q8IXB3 177 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 TSPEARQ8WU66 669 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 SLC35B4Q969S0 331 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 WFIKKN1Q96NZ8 548 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 USB1Q9BQ65 265 aaKnown RBP15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 SPATA9Q9BWV2 254 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 OR10A4Q9H209 315 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 C12orf49Q9H741 205 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 BCO1Q9HAY6 547 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 KLHL28Q9NXS3 571 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 LEF1Q9UJU2 399 aaPredicted RBP15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 TRAPPC4Q9Y296 219 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 GPR52Q9Y2T5 361 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 NDUFAF1Q9Y375 327 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 GMEB1Q9Y692 573 aa15.62■□□□□ 0.09
SCARNA2-201ENST00000458748 ABCA4P78363 2273 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 TMED7-TICAM2A0A0A6YYA0 188 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 ZNF724A8MTY0 619 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 EIF1BO60739 113 aaKnown RBP15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 CYTIPO60759 359 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 BCAS1O75363 584 aaPredicted RBP15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 ETS2P15036 469 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 CXCR1P25024 350 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 MAPK11Q15759 364 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 ZNF311Q5JNZ3 666 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 WBP2NLQ6ICG8 309 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 ZNF836Q6ZNA1 936 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 MTDHQ86UE4 582 aaKnown RBP15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 VRK2Q86Y07 508 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 STEAP2Q8NFT2 490 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 PIGXQ8TBF5 258 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 ZNF524Q96C55 264 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 THOC1Q96FV9 657 aaKnown RBP15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 FOXC2Q99958 501 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 MED4Q9NPJ6 270 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 TMED7Q9Y3B3 224 aa15.61■□□□□ 0.09
SCARNA2-201ENST00000458748 IGHV3-15A0A0B4J1V0 119 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 AP3D1O14617 1153 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 GPR171O14626 319 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 SMAD9O15198 467 aaKnown RBP15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 HRGP04196 525 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 FESP07332 822 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 CRYGSP22914 178 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 SLC6A2P23975 617 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 TACR3P29371 465 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 SLC35A1P78382 337 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 P2RY6Q15077 328 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 PDK3Q15120 406 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 RPS26P11Q5JNZ5 115 aaPredicted RBP15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 REEP3Q6NUK4 255 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 GALNT5Q7Z7M9 940 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 ADGRG3Q86Y34 549 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 BHLHE22Q8NFJ8 381 aaPredicted RBP15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 ZNF607Q96SK3 696 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 PSD2Q9BQI7 771 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 NAA11Q9BSU3 229 aaPredicted RBP15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 CXXC4Q9H2H0 198 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 LIME1Q9H400 295 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 RLIMQ9NVW2 624 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 SLC25A37Q9NYZ2 338 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 TMEM181Q9P2C4 612 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 OSGIN1Q9UJX0 560 aa15.6■□□□□ 0.09
SCARNA2-201ENST00000458748 MAP1AP78559 2803 aaPredicted RBP15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 SETD2Q9BYW2 2564 aaPredicted RBP15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 PGM3O95394 542 aa15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 HOXB9P17482 250 aaPredicted RBP15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 CCNA2P20248 432 aa15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 PSMB1P20618 241 aaKnown RBP15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 OR2B6P58173 313 aa15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 PAGE3Q5JUK9 113 aa15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 PAMR1Q6UXH9 720 aa15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 ZNF100Q8IYN0 542 aa15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 CADM2Q8N3J6 435 aa15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 MAL2Q969L2 176 aa15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 MBD6Q96DN6 1003 aa15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 PLEKHF2Q9H8W4 249 aa15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 SLC52A3Q9NQ40 469 aa15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 CCM2LQ9NUG4 571 aaPredicted RBP15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 VAPAQ9P0L0 249 aa15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 SLC13A4Q9UKG4 626 aa15.59■□□□□ 0.09
SCARNA2-201ENST00000458748 ITPR3Q14573 2671 aa15.58■□□□□ 0.08
SCARNA2-201ENST00000458748 PRORSD1PA6NEY8 169 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms