RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 CPNE4Q96A23 557 aaPredicted RBP11.52□□□□□ -0.57
TREX1-203ENST00000456089 ZG16BQ96DA0 208 aa11.52□□□□□ -0.57
TREX1-203ENST00000456089 AURKBQ96GD4 344 aaPredicted RBP11.52□□□□□ -0.57
TREX1-203ENST00000456089 QRSL1Q9H0R6 528 aaKnown RBP11.52□□□□□ -0.57
TREX1-203ENST00000456089 FANCFQ9NPI8 374 aa11.52□□□□□ -0.57
TREX1-203ENST00000456089 GLRX2Q9NS18 164 aa11.52□□□□□ -0.57
TREX1-203ENST00000456089 SLC6A13Q9NSD5 602 aa11.52□□□□□ -0.57
TREX1-203ENST00000456089 ZNF232Q9UNY5 417 aa11.52□□□□□ -0.57
TREX1-203ENST00000456089 PCDHB14Q9Y5E9 798 aa11.52□□□□□ -0.57
TREX1-203ENST00000456089 A0A096LPI6 279 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 IGHV3-15A0A0B4J1V0 119 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 PRAMEF27A3QJZ7 478 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 AGAP5A6NIR3 686 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 EDF1O60869 148 aaKnown RBP11.51□□□□□ -0.57
TREX1-203ENST00000456089 C1QCP02747 245 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 TROVE2P10155 538 aaKnown RBP eCLIP11.51□□□□□ -0.57
TREX1-203ENST00000456089 TFPIP10646 304 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 FPR1P21462 350 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 AGTR1P30556 359 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 APOBEC1P41238 236 aaKnown RBP11.51□□□□□ -0.57
TREX1-203ENST00000456089 PCYT1AP49585 367 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 FADDQ13158 208 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 LARS2Q15031 903 aaKnown RBP11.51□□□□□ -0.57
TREX1-203ENST00000456089 GTDC1Q4AE62 458 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 LIN52Q52LA3 116 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 SLC25A53Q5H9E4 307 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 TMEM201Q5SNT2 666 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 NUFIP2Q7Z417 695 aaKnown RBP11.51□□□□□ -0.57
TREX1-203ENST00000456089 STK32CQ86UX6 486 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 OR52P1PQ8NH57 321 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 STON2Q8WXE9 905 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 PLPPR2Q96GM1 343 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 OR5B2Q96R09 309 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 PIP5K1AQ99755 562 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 ACTR6Q9GZN1 396 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 SLC38A1Q9H2H9 487 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 EXOSC3Q9NQT5 275 aaKnown RBP11.51□□□□□ -0.57
TREX1-203ENST00000456089 ACER3Q9NUN7 267 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.51□□□□□ -0.57
TREX1-203ENST00000456089 CORO2BQ9UQ03 480 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 ABCA2Q9BZC7 2435 aa11.51□□□□□ -0.57
TREX1-203ENST00000456089 CR1P17927 2039 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 TLN2Q9Y4G6 2542 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 A0A0G2JPF8 293 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 CLDN24A6NM45 220 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 EVPLLA8MZ36 301 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 HNRNPCL2B2RXH8 293 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 HNRNPCL3B7ZW38 293 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 ANGPT2O15123 496 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 HNRNPCL1O60812 293 aaKnown RBP11.5□□□□□ -0.57
TREX1-203ENST00000456089 HEXAP06865 529 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 VIMP08670 466 aaKnown RBP11.5□□□□□ -0.57
TREX1-203ENST00000456089 TFPTP0C1Z6 253 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 HNRNPCL4P0DMR1 293 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 NID1P14543 1247 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 FKBP2P26885 142 aaKnown RBP11.5□□□□□ -0.57
TREX1-203ENST00000456089 HTR3AP46098 478 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 IDH2P48735 452 aaKnown RBP11.5□□□□□ -0.57
TREX1-203ENST00000456089 COPZ1P61923 177 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 RNPS1Q15287 305 aaKnown RBP11.5□□□□□ -0.57
TREX1-203ENST00000456089 RGNQ15493 299 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 ZNF239Q16600 458 aaKnown RBP11.5□□□□□ -0.57
TREX1-203ENST00000456089 ZSWIM7Q19AV6 140 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 AP1ARQ63HQ0 302 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 ZNF704Q6ZNC4 412 aaPredicted RBP11.5□□□□□ -0.57
TREX1-203ENST00000456089 PLEKHM3Q6ZWE6 761 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 GRINAQ7Z429 371 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 ATG4DQ86TL0 474 aaPredicted RBP11.5□□□□□ -0.57
TREX1-203ENST00000456089 FUNDC1Q8IVP5 155 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 TUSC5Q8IXB3 177 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 ZNF440Q8IYI8 595 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 LRRC75A-AS1Q8N1F1 130 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 FAM71CQ8NEG0 241 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 SLC25A43Q8WUT9 341 aaPredicted RBP11.5□□□□□ -0.57
TREX1-203ENST00000456089 SLC38A5Q8WUX1 472 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 COX4I2Q96KJ9 171 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 PAIP1Q9H074 479 aaKnown RBP11.5□□□□□ -0.57
TREX1-203ENST00000456089 MED4Q9NPJ6 270 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 IFT52Q9Y366 437 aa11.5□□□□□ -0.57
TREX1-203ENST00000456089 A0A1W2PNR3 127 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 A0A1W2PP18 115 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 CFAP73A6NFT4 308 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 DNAJA2O60884 412 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 PRKD3O94806 890 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 PCSK6P29122 969 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 PTH2RP49190 550 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 NR1H2P55055 460 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 RAC3P60763 192 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 CSNK2A1P68400 391 aaPredicted RBP11.49□□□□□ -0.57
TREX1-203ENST00000456089 BEX5Q5H9J7 111 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 MRPL2Q5T653 305 aaKnown RBP11.49□□□□□ -0.57
TREX1-203ENST00000456089 METTL21CQ5VZV1 264 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 C20orf204Q6ZNR8 217 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 BEND4Q6ZU67 534 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 FCRLAQ7L513 359 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.49□□□□□ -0.57
TREX1-203ENST00000456089 SLC43A2Q8N370 569 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 RNF128Q8TEB7 428 aa11.49□□□□□ -0.57
TREX1-203ENST00000456089 CNOT9Q92600 299 aaKnown RBP11.49□□□□□ -0.57
TREX1-203ENST00000456089 S100PBPQ96BU1 408 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms