RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 A0A087WUU8 490 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 ELOA3DA6NLF2 546 aaPredicted RBP14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 EFNA2O43921 213 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 CXCR1P25024 350 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 GFRA1P56159 465 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 PPP1R8Q12972 351 aaKnown RBP14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 SELENBP1Q13228 472 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 SEC23BQ15437 767 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 ELOA3BQ3SY89 546 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 WIPI1Q5MNZ9 446 aaPredicted RBP14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 DCST1Q5T197 706 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 PODNL1Q6PEZ8 512 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 SHQ1Q6PI26 577 aaKnown RBP14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 SIAH3Q8IW03 269 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 ELOA3Q8NG57 546 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 OR5M1Q8NGP8 315 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 TMEM239Q8WW34 195 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 HS6ST2Q96MM7 605 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 UBL7Q96S82 380 aaPredicted RBP14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 TMEM43Q9BTV4 400 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 SLC19A3Q9BZV2 496 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 ZNF407Q9C0G0 2248 aa14.99□□□□□ -0.01
CCDC90B-202ENST00000455220 TMEM72A0PK05 275 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 SH3PXD2BA1X283 911 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 LINC01387J3KSC0 135 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 TFECO14948 347 aaPredicted RBP14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 ZNF208O43345 1280 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 SUSD5O60279 629 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 NPIPB7O75200 414 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 E2F6O75461 281 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 IL11P20809 199 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 TCEA1P23193 301 aaKnown RBP14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 SLC10A1Q14973 349 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 CMPK2Q5EBM0 449 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 C3orf33Q6P1S2 294 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 OR5K1Q8NHB7 308 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 RNF217Q8TC41 542 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 LUZP4Q9P127 313 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 TMCC3Q9ULS5 477 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 DNAJC13O75165 2243 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 NBEAQ8NFP9 2946 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 ARRDC5A6NEK1 342 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 IGF2P01344 180 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 IGHG3P01860 377 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 CRYABP02511 175 aaKnown RBP14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 CHMP24386 653 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 FKBP2P26885 142 aaKnown RBP14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 UGT2B15P54855 530 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 ALDH6A1Q02252 535 aaKnown RBP14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 EGR4Q05215 589 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 SLC34A1Q06495 639 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 KLRB1Q12918 225 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 FOXD4Q12950 439 aaPredicted RBP14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 MICAQ29983 383 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 ZNF770Q6IQ21 691 aaPredicted RBP14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 TTC33Q6PID6 262 aaPredicted RBP14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 POMZP3Q6PJE2 187 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 MBOAT2Q6ZWT7 520 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 LSRQ86X29 649 aaPredicted RBP14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 EPHX4Q8IUS5 362 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 RNF113BQ8IZP6 322 aaKnown RBP14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 SVOPLQ8N434 492 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 LINC00471Q8N535 108 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 TEX19Q8NA77 164 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 STK35Q8TDR2 534 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 SLC25A43Q8WUT9 341 aaPredicted RBP14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 SFXN2Q96NB2 322 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 BARD1Q99728 777 aaKnown RBP14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 PSD2Q9BQI7 771 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 SERINC1Q9NRX5 453 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 OAZ3Q9UMX2 235 aa14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 SPIN1Q9Y657 262 aaPredicted RBP14.98□□□□□ -0.01
CCDC90B-202ENST00000455220 PRRC2CQ9Y520 2896 aaKnown RBP14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 A8MVM7 634 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 CASQ2O14958 399 aaPredicted RBP14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 HCN1O60741 890 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 CCNB2O95067 398 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 ZNF23P17027 643 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 RAC1P63000 192 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 LSM11P83369 360 aaKnown RBP eCLIP14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 NHSL2Q5HYW2 709 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 TBPL2Q6SJ96 375 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 C5orf46Q6UWT4 87 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 ZNF730Q6ZMV8 503 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 HIPK1Q86Z02 1210 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 ICA1LQ8NDH6 482 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 OR4K5Q8NGD3 323 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 GABARAPL1Q9H0R8 117 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 SLC6A15Q9H2J7 730 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 MEPEQ9NQ76 525 aaPredicted RBP14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 PLSCR2Q9NRY7 297 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 MED31Q9Y3C7 131 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 ZNF337Q9Y3M9 751 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 LIPGQ9Y5X9 500 aa14.97□□□□□ -0.01
CCDC90B-202ENST00000455220 ZC3H12DA2A288 527 aaKnown RBP14.96□□□□□ -0.01
CCDC90B-202ENST00000455220 CCNA2P20248 432 aa14.96□□□□□ -0.01
CCDC90B-202ENST00000455220 ARHGDIAP52565 204 aa14.96□□□□□ -0.01
CCDC90B-202ENST00000455220 CTBP2P56545 445 aa14.96□□□□□ -0.01
CCDC90B-202ENST00000455220 LY6DQ14210 128 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms