RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 CPNE5Q9HCH3 593 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-213ENST00000454468 ADAM30Q9UKF2 790 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 MKL2Q9ULH7 1088 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 SPEF1Q9Y4P9 236 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 SPTBN2O15020 2390 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 OR6C70A6NIJ9 312 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 RFPL3O75679 317 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 PTTG1O95997 202 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 IGHV4-34P06331 123 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 RAB38P57729 211 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 KIRREL2Q6UWL6 708 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 MED25Q71SY5 747 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 GID4Q8IVV7 300 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 MINDY2Q8NBR6 621 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 MSLNLQ96KJ4 702 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 TBL1XR1Q9BZK7 514 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 OR10A5Q9H207 317 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 NANSQ9NR45 359 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 ZNF222Q9UK12 451 aa11.05□□□□□ -0.64
SMPD4-213ENST00000454468 CDV3Q9UKY7 258 aaKnown RBP11.05□□□□□ -0.64
SMPD4-213ENST00000454468 DSPPQ9NZW4 1301 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 PLXNA2O75051 1894 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 TRIM64BA6NI03 449 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 TNFRSF10CO14798 259 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 FBXO45P0C2W1 286 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 TSFMP43897 325 aaKnown RBP11.04□□□□□ -0.64
SMPD4-213ENST00000454468 DUSP8Q13202 625 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 SELENBP1Q13228 472 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 PRICKLE4Q2TBC4 344 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 MZT2BQ6NZ67 158 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 ZNF322Q6U7Q0 402 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-213ENST00000454468 CHRDL2Q6WN34 429 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 TMEM151BQ8IW70 566 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 KDM8Q8N371 416 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 SLC25A46Q96AG3 418 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 SENP5Q96HI0 755 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-213ENST00000454468 ADAD1Q96M93 576 aaKnown RBP11.04□□□□□ -0.64
SMPD4-213ENST00000454468 CITED4Q96RK1 184 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 NKX3-1Q99801 234 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-213ENST00000454468 FBRSQ9HAH7 460 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 IL20Q9NYY1 176 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 ING1Q9UK53 422 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-213ENST00000454468 SPTBN5Q9NRC6 3674 aaKnown RBP11.04□□□□□ -0.64
SMPD4-213ENST00000454468 IGHV5-51A0A0C4DH38 117 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 TFPIP10646 304 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 HIST1H1CP16403 213 aaKnown RBP11.04□□□□□ -0.64
SMPD4-213ENST00000454468 GABRA5P31644 462 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 ZNF136P52737 540 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 CTXN1P60606 82 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 SQSTM1Q13501 440 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 HES5Q5TA89 166 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 C16orf47Q6ZP98 133 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-213ENST00000454468 GKN2Q86XP6 184 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 GHSRQ92847 366 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 SEMA6CQ9H3T2 930 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 ENAMQ9NRM1 1142 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 ACAD8Q9UKU7 415 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 KIAA1671Q9BY89 1806 aa11.04□□□□□ -0.64
SMPD4-213ENST00000454468 KIF26AQ9ULI4 1882 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-213ENST00000454468 ACOD1A6NK06 481 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 SLC22A31A6NKX4 558 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 C4orf47A7E2U8 309 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 ARHGEF9O43307 516 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 CBX7O95931 251 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 CD3GP09693 182 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 HTR1FP30939 366 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 LTBRP36941 435 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 SNRPD2P62316 118 aaKnown RBP11.03□□□□□ -0.64
SMPD4-213ENST00000454468 ACSM3Q53FZ2 586 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 ZNF544Q6NX49 715 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 RFPL4BQ6ZWI9 263 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 ZNF321PQ8N8H1 164 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 OR6N2Q8NGY6 317 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 Q96M85 177 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 FRMD6Q96NE9 622 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 S1PR5Q9H228 398 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 DUSP22Q9NRW4 184 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 UCKL1Q9NWZ5 548 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 PILRAQ9UKJ1 303 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 MEIOCA2RUB1 952 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 IDSB3KWA1 339 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 TNFRSF10AO00220 468 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 CYR61O00622 381 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 SELENOFO60613 162 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 IL1AP01583 271 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 SLC35E2P0CK97 266 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 SNRPBP14678 240 aaKnown RBP11.03□□□□□ -0.64
SMPD4-213ENST00000454468 CPEP16870 476 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 CASP3P42574 277 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 DHPSP49366 369 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-213ENST00000454468 LGALS3BPQ08380 585 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 GDPGP1Q6ZNW5 385 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 CCDC190Q86UF4 302 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 ARHGAP9Q9BRR9 750 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 ZNF350Q9GZX5 532 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 MEPEQ9NQ76 525 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-213ENST00000454468 TEX13CA0A0J9YWL9 993 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 MCIDASD6RGH6 385 aa11.03□□□□□ -0.64
SMPD4-213ENST00000454468 TPPPO94811 219 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms