RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 OR14L1PQ8NHC6 308 aa13.25□□□□□ -0.29
TNF-208ENST00000449264 POC1BQ8TC44 478 aa13.25□□□□□ -0.29
TNF-208ENST00000449264 ZBTB8AQ96BR9 441 aa13.25□□□□□ -0.29
TNF-208ENST00000449264 DNAJA3Q96EY1 480 aa13.25□□□□□ -0.29
TNF-208ENST00000449264 NRBF2Q96F24 287 aa13.25□□□□□ -0.29
TNF-208ENST00000449264 MRGPRX4Q96LA9 322 aa13.25□□□□□ -0.29
TNF-208ENST00000449264 UBQLN3Q9H347 655 aa13.25□□□□□ -0.29
TNF-208ENST00000449264 TMEM185BQ9H7F4 350 aa13.25□□□□□ -0.29
TNF-208ENST00000449264 SMURF2Q9HAU4 748 aa13.25□□□□□ -0.29
TNF-208ENST00000449264 TMED7Q9Y3B3 224 aa13.25□□□□□ -0.29
TNF-208ENST00000449264 ZNF407Q9C0G0 2248 aa13.25□□□□□ -0.29
TNF-208ENST00000449264 ACOT7O00154 380 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 SUSD5O60279 629 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 POU2F1P14859 743 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 MAGEA5P43359 124 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 IL1RL1Q01638 556 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 LINC00303Q3SY05 128 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 C19orf48Q6RUI8 117 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 MBOAT2Q6ZWT7 520 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 TMEM251Q8N6I4 163 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 RBMXL3Q8N7X1 1067 aaKnown RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 ZFP62Q8NB50 900 aaPredicted RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 FAM83FQ8NEG4 500 aaPredicted RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 C9orf43Q8TAL5 461 aaPredicted RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 PIGXQ8TBF5 258 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 MAGEE2Q8TD90 523 aaPredicted RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 DTNBP1Q96EV8 351 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 FAM46AQ96IP4 442 aaKnown RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 UBL7Q96S82 380 aaPredicted RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 SLC29A1Q99808 456 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 TACO1Q9BSH4 297 aaKnown RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 KLHL4Q9C0H6 718 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 GABARAPL1Q9H0R8 117 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 RASSF4Q9H2L5 321 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 C12orf10Q9HB07 376 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 LUZP4Q9P127 313 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 MED31Q9Y3C7 131 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 PCDHGB6Q9Y5F9 930 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 SPENQ96T58 3664 aaKnown RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 DNAJC13O75165 2243 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 IGKV1D-42A0A075B6H8 117 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 TMEM72A0PK05 275 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 GLSO94925 669 aaPredicted RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 RASAL1O95294 804 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 CELA3AP09093 270 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 PEPDP12955 493 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 IL11P20809 199 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 VHLP40337 213 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 APOBEC1P41238 236 aaKnown RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 EIF1P41567 113 aaKnown RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 RBM34P42696 430 aaKnown RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 GPR4P46093 362 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 PPIAP62937 165 aaKnown RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 ALDH6A1Q02252 535 aaKnown RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 CRYZQ08257 329 aaKnown RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 SLC25A53Q5H9E4 307 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 WIPI1Q5MNZ9 446 aaPredicted RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 PGBD2Q6P3X8 592 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 LINC00114Q6XXX2 140 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 Q6ZS92 163 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 SLC22A16Q86VW1 577 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 ADGRG3Q86Y34 549 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 GTPBP3Q969Y2 492 aaKnown RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 HS6ST2Q96MM7 605 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 FEVQ99581 238 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 RBM4BQ9BQ04 359 aaKnown RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 ZNF426Q9BUY5 554 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 RBM4Q9BWF3 364 aaKnown RBP13.24□□□□□ -0.29
TNF-208ENST00000449264 VCXQ9H320 206 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 VCX3BQ9H321 246 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 PRORYQ9H606 182 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 C20orf141Q9NUB4 165 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 CHRNA9Q9UGM1 479 aa13.24□□□□□ -0.29
TNF-208ENST00000449264 USP24Q9UPU5 2620 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 ZC3H12DA2A288 527 aaKnown RBP13.23□□□□□ -0.29
TNF-208ENST00000449264 OR2M5A3KFT3 312 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 ENO4A6NNW6 628 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 H3BML4 177 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 ETV2O00321 342 aaPredicted RBP13.23□□□□□ -0.29
TNF-208ENST00000449264 ZIC3O60481 467 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 IFI30P13284 250 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 ZNF24P17028 368 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 PPP2R2BQ00005 443 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 DAG1Q14118 895 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 ZNF770Q6IQ21 691 aaPredicted RBP13.23□□□□□ -0.29
TNF-208ENST00000449264 PRICKLE2Q7Z3G6 844 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 GTPBP8Q8N3Z3 284 aaPredicted RBP13.23□□□□□ -0.29
TNF-208ENST00000449264 LINC00471Q8N535 108 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 SMPDL3BQ92485 455 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 SFXN2Q96NB2 322 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 NIPSNAP1Q9BPW8 284 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 OR2B2Q9GZK3 357 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 OR11A1Q9GZK7 315 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 KRCC1Q9NPI7 259 aaPredicted RBP13.23□□□□□ -0.29
TNF-208ENST00000449264 MEPEQ9NQ76 525 aaPredicted RBP13.23□□□□□ -0.29
TNF-208ENST00000449264 B3GNT3Q9Y2A9 372 aa13.23□□□□□ -0.29
TNF-208ENST00000449264 BSNQ9UPA5 3926 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 ARRDC5A6NEK1 342 aa13.22□□□□□ -0.29
TNF-208ENST00000449264 TFECO14948 347 aaPredicted RBP13.22□□□□□ -0.29
TNF-208ENST00000449264 GASTP01350 101 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms