RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 WISP1O95388 367 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 ADH6P28332 368 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 UGT2B15P54855 530 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 LSM11P83369 360 aaKnown RBP eCLIP17.69■□□□□ 0.42
SGCE-207ENST00000447873 DAG1Q14118 895 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 ZNF169Q14929 603 aaPredicted RBP17.69■□□□□ 0.42
SGCE-207ENST00000447873 ZNF770Q6IQ21 691 aaPredicted RBP17.69■□□□□ 0.42
SGCE-207ENST00000447873 PPP4R4Q6NUP7 873 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 LSRQ86X29 649 aaPredicted RBP17.69■□□□□ 0.42
SGCE-207ENST00000447873 ADGRG3Q86Y34 549 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 NRMQ8IXM6 262 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 GALNT4Q8N4A0 578 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 AQP11Q8NBQ7 271 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 OR14L1PQ8NHC6 308 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 PIGXQ8TBF5 258 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 PSD2Q9BQI7 771 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 ZNF703Q9H7S9 590 aaPredicted RBP17.69■□□□□ 0.42
SGCE-207ENST00000447873 SMURF2Q9HAU4 748 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 KRCC1Q9NPI7 259 aaPredicted RBP17.69■□□□□ 0.42
SGCE-207ENST00000447873 TP53TG5Q9Y2B4 290 aa17.69■□□□□ 0.42
SGCE-207ENST00000447873 ACOT7O00154 380 aa17.68■□□□□ 0.42
SGCE-207ENST00000447873 SUSD5O60279 629 aa17.68■□□□□ 0.42
SGCE-207ENST00000447873 ANXA8P13928 327 aa17.68■□□□□ 0.42
SGCE-207ENST00000447873 ZNF26P17031 533 aaPredicted RBP17.68■□□□□ 0.42
SGCE-207ENST00000447873 ALDH3A2P51648 485 aa17.68■□□□□ 0.42
SGCE-207ENST00000447873 RAET1LQ5VY80 246 aa17.68■□□□□ 0.42
SGCE-207ENST00000447873 PGBD2Q6P3X8 592 aa17.68■□□□□ 0.42
SGCE-207ENST00000447873 Q6ZS92 163 aa17.68■□□□□ 0.42
SGCE-207ENST00000447873 P3H2Q8IVL5 708 aa17.68■□□□□ 0.42
SGCE-207ENST00000447873 GTPBP8Q8N3Z3 284 aaPredicted RBP17.68■□□□□ 0.42
SGCE-207ENST00000447873 PACRGLQ8N7B6 248 aa17.68■□□□□ 0.42
SGCE-207ENST00000447873 OR5M1Q8NGP8 315 aa17.68■□□□□ 0.42
SGCE-207ENST00000447873 POC1BQ8TC44 478 aa17.68■□□□□ 0.42
SGCE-207ENST00000447873 CRELD1Q96HD1 420 aa17.68■□□□□ 0.42
SGCE-207ENST00000447873 ZMIZ1Q9ULJ6 1067 aa17.68■□□□□ 0.42
SGCE-207ENST00000447873 MRPS18CQ9Y3D5 142 aaKnown RBP17.68■□□□□ 0.42
SGCE-207ENST00000447873 C7orf72A4D263 438 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 FAM166BA8MTA8 275 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 PIP5K1CO60331 668 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 GLSO94925 669 aaPredicted RBP17.67■□□□□ 0.42
SGCE-207ENST00000447873 GASTP01350 101 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 FAM87AP0C7U9 286 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 POU2F1P14859 743 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 FOXK1P85037 733 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 PPP2R2BQ00005 443 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 HYAL4Q2M3T9 481 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.67■□□□□ 0.42
SGCE-207ENST00000447873 GLYR1Q49A26 553 aaPredicted RBP17.67■□□□□ 0.42
SGCE-207ENST00000447873 ANKRD34AQ69YU3 496 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 ASB18Q6ZVZ8 466 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 PRICKLE2Q7Z3G6 844 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 ZER1Q7Z7L7 766 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 YRDCQ86U90 279 aaKnown RBP17.67■□□□□ 0.42
SGCE-207ENST00000447873 SLC22A16Q86VW1 577 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 RBMXL3Q8N7X1 1067 aaKnown RBP17.67■□□□□ 0.42
SGCE-207ENST00000447873 FAM83FQ8NEG4 500 aaPredicted RBP17.67■□□□□ 0.42
SGCE-207ENST00000447873 PFN4Q8NHR9 129 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 PIGQQ9BRB3 760 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 TMEM43Q9BTV4 400 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 MFRPQ9BY79 579 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 SLC19A3Q9BZV2 496 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 ZNF556Q9HAH1 456 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 MEPEQ9NQ76 525 aaPredicted RBP17.67■□□□□ 0.42
SGCE-207ENST00000447873 SERINC1Q9NRX5 453 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 CHRNA9Q9UGM1 479 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 MGAT4BQ9UQ53 548 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 ZZEF1O43149 2961 aa17.67■□□□□ 0.42
SGCE-207ENST00000447873 TMEM72A0PK05 275 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 HPRP00739 348 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 ALPLP05186 524 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 IFI30P13284 250 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 ZNF17P17021 662 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 CBLP22681 906 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 MAGEA5P43359 124 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 DAPP51397 102 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 MAP2K6P52564 334 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 PPIAP62937 165 aaKnown RBP17.66■□□□□ 0.42
SGCE-207ENST00000447873 LINC00303Q3SY05 128 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 C1orf94Q6P1W5 598 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 FAHD1Q6P587 224 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 CDK20Q8IZL9 346 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 TMEM251Q8N6I4 163 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 GTPBP3Q969Y2 492 aaKnown RBP17.66■□□□□ 0.42
SGCE-207ENST00000447873 FAM46AQ96IP4 442 aaKnown RBP17.66■□□□□ 0.42
SGCE-207ENST00000447873 USE1Q9NZ43 259 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 B3GNT3Q9Y2A9 372 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 IGKV1D-42A0A075B6H8 117 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 A8MVM7 634 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 HPNP05981 417 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 IGFBP5P24593 272 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 OMPP47874 163 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 PMP22Q01453 160 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 IL1RL1Q01638 556 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 PRKCDQ05655 676 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 CRYZQ08257 329 aaKnown RBP17.66■□□□□ 0.42
SGCE-207ENST00000447873 TMEM44Q2T9K0 475 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 ATP6V1C2Q8NEY4 427 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 C9orf43Q8TAL5 461 aaPredicted RBP17.66■□□□□ 0.42
SGCE-207ENST00000447873 NIPSNAP1Q9BPW8 284 aa17.66■□□□□ 0.42
SGCE-207ENST00000447873 TACO1Q9BSH4 297 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms