RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 GABRG1Q8N1C3 465 aa17.84■□□□□ 0.45
LRCH3-208ENST00000443727 OR52P1PQ8NH57 321 aa17.84■□□□□ 0.45
LRCH3-208ENST00000443727 KISS1RQ969F8 398 aaPredicted RBP17.84■□□□□ 0.45
LRCH3-208ENST00000443727 OR11A1Q9GZK7 315 aa17.84■□□□□ 0.45
LRCH3-208ENST00000443727 HDGFL3Q9Y3E1 203 aa17.84■□□□□ 0.45
LRCH3-208ENST00000443727 TMED7-TICAM2A0A0A6YYA0 188 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 ZNF724A8MTY0 619 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 HMGB1P1B2RPK0 211 aaPredicted RBP17.83■□□□□ 0.44
LRCH3-208ENST00000443727 ADAM11O75078 769 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 GCM2O75603 506 aaPredicted RBP17.83■□□□□ 0.44
LRCH3-208ENST00000443727 TACR3P29371 465 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 OR3A2P47893 321 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 MVDP53602 400 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 NR1H2P55055 460 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 AQP5P55064 265 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 OR2B6P58173 313 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 PLAURQ03405 335 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 LARS2Q15031 903 aaKnown RBP17.83■□□□□ 0.44
LRCH3-208ENST00000443727 TSC22D1Q15714 1073 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 SFRP5Q5T4F7 317 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 SLC2A7Q6PXP3 512 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 ADGRG3Q86Y34 549 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 SLC38A5Q8WUX1 472 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 GTF2H4Q92759 462 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 PIGTQ969N2 578 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 DDIT4LQ96D03 193 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 ARL5BQ96KC2 179 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 ZNF300Q96RE9 604 aaPredicted RBP17.83■□□□□ 0.44
LRCH3-208ENST00000443727 TMUB1Q9BVT8 246 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 RAD21L1Q9H4I0 556 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 INTS9Q9NV88 658 aaKnown RBP17.83■□□□□ 0.44
LRCH3-208ENST00000443727 RLIMQ9NVW2 624 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 ZNF232Q9UNY5 417 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 TMED7Q9Y3B3 224 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 MTORP42345 2549 aa17.83■□□□□ 0.44
LRCH3-208ENST00000443727 NR5A2O00482 541 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 KLF4O43474 513 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 SMPD2O60906 423 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 PMS2P2O95744 297 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 TFPTP0C1Z6 253 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 SLC1A3P43003 542 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 COPZ1P61923 177 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 ADAM8P78325 824 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 EPS8Q12929 822 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 CAPRIN1Q14444 709 aaKnown RBP17.82■□□□□ 0.44
LRCH3-208ENST00000443727 C20orf204Q6ZNR8 217 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 VRK2Q86Y07 508 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 PIGXQ8TBF5 258 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 PLPPR2Q96GM1 343 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 TMEM19Q96HH6 336 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 CCL19Q99731 98 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 EBF4Q9BQW3 602 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 CCDC28BQ9BUN5 200 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 ARMC7Q9H6L4 198 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 NGBQ9NPG2 151 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 OSGIN1Q9UJX0 560 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 ING1Q9UK53 422 aaPredicted RBP17.82■□□□□ 0.44
LRCH3-208ENST00000443727 PCDHB14Q9Y5E9 798 aa17.82■□□□□ 0.44
LRCH3-208ENST00000443727 A0A0G2JPF8 293 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 HNRNPCL2B2RXH8 293 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 ZNF814B7Z6K7 855 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 HNRNPCL3B7ZW38 293 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 CLIC1O00299 241 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 FAAHO00519 579 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 DNPH1O43598 174 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 HNRNPCL1O60812 293 aaKnown RBP17.81■□□□□ 0.44
LRCH3-208ENST00000443727 HNRNPCL4P0DMR1 293 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 RIPPLY3P57055 190 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 NKX6-1P78426 367 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-208ENST00000443727 FOXD4Q12950 439 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-208ENST00000443727 ITGADQ13349 1161 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 MAPK11Q15759 364 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 RPS26P11Q5JNZ5 115 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-208ENST00000443727 ZNF836Q6ZNA1 936 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 Q6ZT83 130 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 BHLHA15Q7RTS1 189 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-208ENST00000443727 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.81■□□□□ 0.44
LRCH3-208ENST00000443727 P3H2Q8IVL5 708 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 HSD17B8Q92506 261 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 PAIP1Q9H074 479 aaKnown RBP17.81■□□□□ 0.44
LRCH3-208ENST00000443727 CCDC167Q9P0B6 97 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 TMEM181Q9P2C4 612 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 PRSS50Q9UI38 385 aa17.81■□□□□ 0.44
LRCH3-208ENST00000443727 ZNF443Q9Y2A4 671 aaPredicted RBP17.81■□□□□ 0.44
LRCH3-208ENST00000443727 DSPPQ9NZW4 1301 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 A0A096LPI6 279 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 CDHR4A6H8M9 788 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 C5orf58C9J3I9 102 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 GPR171O14626 319 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 ARHGEF9O43307 516 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 ZNF208O43345 1280 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 GKN3PP0CG01 181 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 NCF2P19878 526 aaPredicted RBP17.8■□□□□ 0.44
LRCH3-208ENST00000443727 CXCR1P25024 350 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 LOXP28300 417 aaPredicted RBP17.8■□□□□ 0.44
LRCH3-208ENST00000443727 MRPL19P49406 292 aaKnown RBP17.8■□□□□ 0.44
LRCH3-208ENST00000443727 SLC35A1P78382 337 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 RGNQ15493 299 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 ZSWIM7Q19AV6 140 aa17.8■□□□□ 0.44
LRCH3-208ENST00000443727 ABLIM2Q6H8Q1 611 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms