RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 MRTO4Q9UKD2 239 aaKnown RBP8.39□□□□□ -1.07
COPB1-202ENST00000439561 PLCL2Q9UPR0 1127 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 FARSAQ9Y285 508 aaKnown RBP8.39□□□□□ -1.07
COPB1-202ENST00000439561 NLRC5Q86WI3 1866 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 F5H5P2 479 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 PRAF2O60831 178 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 ITGA10O75578 1167 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 CBX7O95931 251 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 HOXD4P09016 255 aaPredicted RBP8.39□□□□□ -1.07
COPB1-202ENST00000439561 CXCL2P19875 107 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 TLX1P31314 330 aaPredicted RBP8.39□□□□□ -1.07
COPB1-202ENST00000439561 MMP15P51511 669 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 MAPK14Q16539 360 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 SLC25A30Q5SVS4 291 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 FAM69AQ5T7M9 428 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 TMEM215Q68D42 235 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 PAQR7Q86WK9 346 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 ZNF547Q8IVP9 402 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 OR4E2Q8NGC2 313 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 OR10K1Q8NGX5 313 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 DUSP19Q8WTR2 217 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 SUSD6Q92537 303 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 DVL3Q92997 716 aaPredicted RBP8.39□□□□□ -1.07
COPB1-202ENST00000439561 ELP4Q96EB1 424 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 WDR89Q96FK6 387 aaPredicted RBP8.39□□□□□ -1.07
COPB1-202ENST00000439561 LRRC46Q96FV0 321 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 MRPL48Q96GC5 212 aaKnown RBP8.39□□□□□ -1.07
COPB1-202ENST00000439561 SLC6A15Q9H2J7 730 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 HPF1Q9NWY4 346 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 PPIL1Q9Y3C6 166 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 IER3IP1Q9Y5U9 82 aa8.39□□□□□ -1.07
COPB1-202ENST00000439561 IDSB3KWA1 339 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 BLOC1S5-TXNDC5H3BN57 136 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 PEX12O00623 359 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 PAK4O96013 591 aaPredicted RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 ART1P52961 327 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 DLX5P56178 289 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 ZP1P60852 638 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 SEC61A1P61619 476 aaKnown RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 CSNK1G2P78368 415 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 HAGHLQ6PII5 290 aaPredicted RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 ZNF627Q7L945 461 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 SSX6Q7RTT6 188 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 ADIPOR2Q86V24 386 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 TCEAL8Q8IYN2 117 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 STPG2Q8N412 459 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 RFLNBQ8N5W9 214 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 TMEM185AQ8NFB2 350 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 SMIM4Q8WVI0 70 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 TSEN15Q8WW01 171 aaKnown RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 SLC35A4Q96G79 324 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 PEX11GQ96HA9 241 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 CNN2Q99439 309 aaKnown RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 DPEP2Q9H4A9 486 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 MTHFD2LQ9H903 347 aaPredicted RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 SLC35A3Q9Y2D2 325 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 PLEKHA6Q9Y2H5 1048 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 NPFFR2Q9Y5X5 522 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 DOCK6Q96HP0 2047 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 KANTRA0A1W2PQU2 76 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 LRIT2A6NDA9 550 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 MAN2B1O00754 1011 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 KHNYNO15037 678 aaKnown RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 GREM1O60565 184 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 IGHA1P01876 353 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 ATP5A1P25705 553 aaKnown RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 SLC6A6P31641 620 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 BCL6P41182 706 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 ACTC1P68032 377 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 ACTA1P68133 377 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 SIRPAP78324 504 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 FUT5Q11128 374 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 SREBF2Q12772 1141 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 ZNF169Q14929 603 aaPredicted RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 GPNMBQ14956 572 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 UBE2NLQ5JXB2 153 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 CLVS2Q5SYC1 327 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 HACD4Q5VWC8 232 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 PLPP4Q5VZY2 271 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 VASNQ6EMK4 673 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 RAB12Q6IQ22 244 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 ZNF836Q6ZNA1 936 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 OR51Q1Q8NH59 317 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 DPYSL5Q9BPU6 564 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 C7orf50Q9BRJ6 194 aaKnown RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 PELI2Q9HAT8 420 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 BCL2L10Q9HD36 194 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 MRPS18AQ9NVS2 196 aaKnown RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 NTMQ9P121 344 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 ATPIF1Q9UII2 106 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 NOP16Q9Y3C1 178 aaKnown RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 TRAV18A0A075B6X5 111 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 IGLON5A6NGN9 336 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 PRICKLE3O43900 615 aaPredicted RBP8.38□□□□□ -1.07
COPB1-202ENST00000439561 OR10H2O60403 315 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 ITPKBP27987 946 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 GABRA3P34903 492 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 ZNF234Q14588 700 aa8.38□□□□□ -1.07
COPB1-202ENST00000439561 GPAT4Q86UL3 456 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms