RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 A0A1W2PQD3 144 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 ZNF670-ZNF695F2Z2N8 137 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 TNFRSF10AO00220 468 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 TSPAN2O60636 221 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 PPP1R3DO95685 299 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 MPLP40238 635 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 SLC6A8P48029 635 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 CLPPQ16740 277 aaPredicted RBP23.52■■□□□ 1.36
CPNE1-216ENST00000437340 TUBA3EQ6PEY2 450 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 ATG4DQ86TL0 474 aaPredicted RBP23.52■■□□□ 1.36
CPNE1-216ENST00000437340 LHFPL3Q86UP9 236 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 GATSQ8NAP1 163 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 PTP4A1Q93096 173 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 TMEM43Q9BTV4 400 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 ASPNQ9BXN1 380 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 ARRDC1-AS1Q9H2J1 176 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 C12orf10Q9HB07 376 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 ZNF337Q9Y3M9 751 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 ELOA3DA6NLF2 546 aaPredicted RBP23.52■■□□□ 1.36
CPNE1-216ENST00000437340 WWP2O00308 870 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 CER1O95813 267 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 NR0B1P51843 470 aaKnown RBP23.52■■□□□ 1.36
CPNE1-216ENST00000437340 ELOA3BQ3SY89 546 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 NKAIN1Q4KMZ8 207 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 Q6ZNX1 250 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 SIRT6Q8N6T7 355 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 ELOA3Q8NG57 546 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 NACC2Q96BF6 587 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 INPP5EQ9NRR6 644 aa23.52■■□□□ 1.36
CPNE1-216ENST00000437340 FER1L5A0AVI2 2057 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 OIP5O43482 229 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 AKAP8O43823 692 aaKnown RBP23.51■■□□□ 1.35
CPNE1-216ENST00000437340 ICOSLGO75144 302 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 OR7A10O76100 309 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 ONECUT2O95948 504 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 NOS3P29474 1203 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 PNLIPRP2P54317 469 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 PLCXD2Q0VAA5 305 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 CBLN3Q6UW01 205 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 LSRQ86X29 649 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-216ENST00000437340 EID2Q8N6I1 236 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 ACBD7Q8N6N7 88 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 OR51G2Q8NGK0 314 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 KISS1RQ969F8 398 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-216ENST00000437340 C6orf62Q9GZU0 229 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-216ENST00000437340 CHRNA9Q9UGM1 479 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 CAB39Q9Y376 341 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-216ENST00000437340 PEX16Q9Y5Y5 336 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 RALGAPA1Q6GYQ0 2036 aa23.51■■□□□ 1.35
CPNE1-216ENST00000437340 A0A075B6Q4 140 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 TAF4O00268 1085 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 GNB5O14775 395 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 SCRG1O75711 98 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 GABRA5P31644 462 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 TCEAL6Q6IPX3 200 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 LANCL3Q6ZV70 420 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 LIPHQ8WWY8 451 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 TCEAL3Q969E4 200 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 CCDC74BQ96LY2 380 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 TEAD3Q99594 435 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 GTPBP2Q9BX10 602 aaKnown RBP23.5■■□□□ 1.35
CPNE1-216ENST00000437340 HCAR1Q9BXC0 346 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 NRSN2Q9GZP1 204 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 MED20Q9H944 212 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 HAO2Q9NYQ3 351 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 KLHL21Q9UJP4 597 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 SF3B6Q9Y3B4 125 aaKnown RBP23.5■■□□□ 1.35
CPNE1-216ENST00000437340 IGKV1D-42A0A075B6H8 117 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 CCDC182A6NF36 153 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 ALG1L2C9J202 215 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 EIF4E2O60573 245 aaKnown RBP23.5■■□□□ 1.35
CPNE1-216ENST00000437340 SYPP08247 313 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 SLC2A5P22732 501 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 CD40LGP29965 261 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 S100A5P33763 92 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 CCR4P51679 360 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 DCDP81605 110 aaKnown RBP23.5■■□□□ 1.35
CPNE1-216ENST00000437340 BDH1Q02338 343 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 CRMP1Q14194 572 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 ISXQ2M1V0 245 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 C11orf91Q3C1V1 193 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 DPY19L2P2Q6ZN68 376 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 PRR22Q8IZ63 422 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 SLC38A9Q8NBW4 561 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 LOXL4Q96JB6 756 aa23.5■■□□□ 1.35
CPNE1-216ENST00000437340 SLC30A4O14863 429 aa23.49■■□□□ 1.35
CPNE1-216ENST00000437340 PPP5CP53041 499 aa23.49■■□□□ 1.35
CPNE1-216ENST00000437340 PRPS1P60891 318 aa23.49■■□□□ 1.35
CPNE1-216ENST00000437340 KLHL12Q53G59 568 aa23.49■■□□□ 1.35
CPNE1-216ENST00000437340 PWWP2BQ6NUJ5 590 aa23.49■■□□□ 1.35
CPNE1-216ENST00000437340 TMPRSS11AQ6ZMR5 421 aa23.49■■□□□ 1.35
CPNE1-216ENST00000437340 NUP54Q7Z3B4 507 aa23.49■■□□□ 1.35
CPNE1-216ENST00000437340 BTLAQ7Z6A9 289 aa23.49■■□□□ 1.35
CPNE1-216ENST00000437340 TP53INP1Q96A56 240 aa23.49■■□□□ 1.35
CPNE1-216ENST00000437340 OMA1Q96E52 524 aa23.49■■□□□ 1.35
CPNE1-216ENST00000437340 TRMT61AQ96FX7 289 aaKnown RBP23.49■■□□□ 1.35
CPNE1-216ENST00000437340 ERMAPQ96PL5 475 aaPredicted RBP23.49■■□□□ 1.35
CPNE1-216ENST00000437340 TXNL4BQ9NX01 149 aaKnown RBP23.49■■□□□ 1.35
CPNE1-216ENST00000437340 HEATR5AQ86XA9 2040 aa23.49■■□□□ 1.35
CPNE1-216ENST00000437340 PRR33A8MZF0 331 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms