RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 IFT52Q9Y366 437 aa5.17□□□□□ -1.58
HMGB3P24-201ENST00000433260 CHST2Q9Y4C5 530 aa5.17□□□□□ -1.58
HMGB3P24-201ENST00000433260 NBASA2RRP1 2371 aa5.17□□□□□ -1.58
HMGB3P24-201ENST00000433260 MYO18BQ8IUG5 2567 aa5.17□□□□□ -1.58
HMGB3P24-201ENST00000433260 BOD1L1Q8NFC6 3051 aa5.17□□□□□ -1.58
HMGB3P24-201ENST00000433260 BAHCC1Q9P281 2608 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 HIVEP3Q5T1R4 2406 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 GCN1Q92616 2671 aaKnown RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 TMED7-TICAM2A0A0A6YYA0 188 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 A0A1W2PNV4 684 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 TMEM72A0PK05 275 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 C7orf72A4D263 438 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 GJE1A6NN92 205 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 M0QX08 132 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 SULT2B1O00204 365 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 SYT5O00445 386 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 ADAMDEC1O15204 470 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 HNRNPRO43390 633 aaKnown RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 CCDC22O60826 627 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 FBXO24O75426 580 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 COX4I1P13073 169 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 PRF1P14222 555 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 UQCRBP14927 111 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 DRD4P21917 467 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 RPS4Y1P22090 263 aaKnown RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 CXCR1P25024 350 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 SLC7A1P30825 629 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 CPOXP36551 454 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 APOBEC1P41238 236 aaKnown RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 ACAA2P42765 397 aaKnown RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 MAGEA8P43361 318 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 KIR2DL2P43627 348 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 CPA2P48052 419 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 KCNJ5P48544 419 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 CTBP2P56545 445 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 OR2B6P58173 313 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 COPZ1P61923 177 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 EEF1A1P68104 462 aaKnown RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 FAM27E3Q08E93 113 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 EPS8Q12929 822 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 SELENBP1Q13228 472 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 POU4F3Q15319 338 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 MAPRE2Q15555 327 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 EXOC3L2Q2M3D2 409 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 SLC25A35Q3KQZ1 300 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 LIN52Q52LA3 116 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 ANKRD34AQ69YU3 496 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 OR2A2Q6IF42 318 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 GRINAQ7Z429 371 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 SERPINA11Q86U17 422 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 PTOV1Q86YD1 416 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 TUSC5Q8IXB3 177 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 CMIPQ8IY22 773 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZZZ3Q8IYH5 903 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 DPP10Q8N608 796 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 METTL25Q8N6Q8 603 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 SMYD1Q8NB12 490 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 PCYOX1LQ8NBM8 494 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 RP9Q8TA86 221 aaKnown RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 BBS10Q8TAM1 723 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 SLC26A7Q8TE54 656 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 ST8SIA1Q92185 356 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 PMM1Q92871 262 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 RCN3Q96D15 328 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 STARD4Q96DR4 205 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 LRRC46Q96FV0 321 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 ADGRG7Q96K78 797 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 ARL5BQ96KC2 179 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 WFDC6Q9BQY6 131 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 CPPED1Q9BRF8 314 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 SPATA9Q9BWV2 254 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 RBM24Q9BX46 236 aaKnown RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 RSPO3Q9BXY4 272 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 SRXN1Q9BYN0 137 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 OR11A1Q9GZK7 315 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 ENKD1Q9H0I2 346 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 MRPL18Q9H0U6 180 aaKnown RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 OPN3Q9H1Y3 402 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 ARMC7Q9H6L4 198 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 BCL2L10Q9HD36 194 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 TIGARQ9NQ88 270 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 EXOSC3Q9NQT5 275 aaKnown RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 OSGIN1Q9UJX0 560 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 PROCRQ9UNN8 238 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 TMED7Q9Y3B3 224 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 CAPN7Q9Y6W3 813 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 SMG1Q96Q15 3661 aaKnown RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 DSPPQ9NZW4 1301 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 ICE1Q9Y2F5 2266 aa5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 FASNP49327 2511 aaKnown RBP5.16□□□□□ -1.58
HMGB3P24-201ENST00000433260 SPTA1P02549 2419 aa5.15□□□□□ -1.58
HMGB3P24-201ENST00000433260 POLEQ07864 2286 aa5.15□□□□□ -1.58
HMGB3P24-201ENST00000433260 ZC3H12DA2A288 527 aaKnown RBP5.15□□□□□ -1.59
HMGB3P24-201ENST00000433260 CCT8L1PA6NM43 557 aa5.15□□□□□ -1.59
HMGB3P24-201ENST00000433260 A8MXE2 369 aa5.15□□□□□ -1.59
HMGB3P24-201ENST00000433260 FAM229AH3BQW9 127 aa5.15□□□□□ -1.59
HMGB3P24-201ENST00000433260 SNX3O60493 162 aa5.15□□□□□ -1.59
HMGB3P24-201ENST00000433260 DNAJA2O60884 412 aa5.15□□□□□ -1.59
HMGB3P24-201ENST00000433260 DEAF1O75398 565 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P24-201ENST00000433260 GCM2O75603 506 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms