RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ZNF596Q8TC21 504 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 MCHR2Q969V1 340 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 OPTNQ96CV9 577 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 RPGRIP1Q96KN7 1286 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 PPP1R36Q96LQ0 422 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 C12orf66Q96MD2 445 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 TRNT1Q96Q11 434 aaKnown RBP2.24□□□□□ -2.05
CLK1-204ENST00000432425 C11orf70Q9BRQ4 267 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 ELOVL4Q9GZR5 314 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 FBXO44Q9H4M3 255 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 ISG20L2Q9H9L3 353 aaKnown RBP2.24□□□□□ -2.05
CLK1-204ENST00000432425 LZTFL1Q9NQ48 299 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 MRPL40Q9NQ50 206 aaKnown RBP2.24□□□□□ -2.05
CLK1-204ENST00000432425 YAE1D1Q9NRH1 226 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 VPS54Q9P1Q0 977 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 ONECUT1Q9UBC0 465 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 CTSFQ9UBX1 484 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 GGA2Q9UJY4 613 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 ADCY9O60503 1353 aa2.24□□□□□ -2.05
CLK1-204ENST00000432425 NPC1L1Q9UHC9 1359 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 NPIPA5A0A0B4J1W7 369 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 C1orf232A0A0U1RR37 186 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 LOC105371267A0A1B0GV96 52 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 OR52A4PA6NMU1 304 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 GABRR3A8MPY1 467 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 NPIPA5E9PKD4 350 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 GOLGA6L19H0YKK7 550 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 TEX46H3BTG2 121 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 HIP1O00291 1037 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 EI24O14681 340 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 TYROBPO43914 113 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 TBX19O60806 448 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 RBBP9O75884 186 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 CDK14O94921 469 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 LCA5LO95447 670 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 SLC2A10O95528 541 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 AGTP01019 485 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 IGKV3-11P04433 115 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 HSPB1P04792 205 aaKnown RBP2.23□□□□□ -2.05
CLK1-204ENST00000432425 UGT2B4P06133 528 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 ALPIP09923 528 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 CALCBP10092 127 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 ZNF32P17041 273 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 PSMB1P20618 241 aaKnown RBP2.23□□□□□ -2.05
CLK1-204ENST00000432425 OTX2P32243 289 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 ADRA1AP35348 466 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 SAA4P35542 130 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 SYKP43405 635 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 CBX5P45973 191 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 GDI2P50395 445 aaKnown RBP2.23□□□□□ -2.05
CLK1-204ENST00000432425 BCAP31P51572 246 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 MNAT1P51948 309 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 SKP1P63208 163 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 ZNF33BQ06732 778 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 NCBP1Q09161 790 aaKnown RBP2.23□□□□□ -2.05
CLK1-204ENST00000432425 IL18Q14116 193 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 CASP8Q14790 479 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 ANGPT1Q15389 498 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 FAM83EQ2M2I3 478 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 HKDC1Q2TB90 917 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 KLHL40Q2TBA0 621 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 ALKBH6Q3KRA9 238 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 ADPRMQ3LIE5 342 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 NKAIN1Q4KMZ8 207 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 ATF7IP2Q5U623 682 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 LRRC66Q68CR7 880 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 SPECC1LQ69YQ0 1117 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 PTRHD1Q6GMV3 140 aaKnown RBP2.23□□□□□ -2.05
CLK1-204ENST00000432425 USP50Q70EL3 339 aaPredicted RBP2.23□□□□□ -2.05
CLK1-204ENST00000432425 TRMT10CQ7L0Y3 403 aaKnown RBP2.23□□□□□ -2.05
CLK1-204ENST00000432425 NDUFAF7Q7L592 441 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 PRSS48Q7RTY5 328 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 CDKL3Q8IVW4 592 aaPredicted RBP2.23□□□□□ -2.05
CLK1-204ENST00000432425 STHQ8IWL8 128 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 CENPLQ8N0S6 344 aaPredicted RBP2.23□□□□□ -2.05
CLK1-204ENST00000432425 CADM2Q8N3J6 435 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 RNF175Q8N4F7 328 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 FAM86B1Q8N7N1 296 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 BCORP1Q8N888 145 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 SIDT2Q8NBJ9 832 aaKnown RBP2.23□□□□□ -2.05
CLK1-204ENST00000432425 MRPL53Q96EL3 112 aaKnown RBP2.23□□□□□ -2.05
CLK1-204ENST00000432425 CHMP6Q96FZ7 201 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 C16orf74Q96GX8 76 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 SLC41A3Q96GZ6 507 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 ZBED3Q96IU2 234 aaPredicted RBP2.23□□□□□ -2.05
CLK1-204ENST00000432425 TECTBQ96PL2 329 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 CPXM1Q96SM3 734 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 SELENOSQ9BQE4 189 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 MRPL13Q9BYD1 178 aaKnown RBP2.23□□□□□ -2.05
CLK1-204ENST00000432425 PARD6GQ9BYG4 376 aaPredicted RBP2.23□□□□□ -2.05
CLK1-204ENST00000432425 PRRG3Q9BZD7 231 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 NMUR2Q9GZQ4 415 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 MFFQ9GZY8 342 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 BLZF1Q9H2G9 400 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 DCLRE1BQ9H816 532 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 MAGEF1Q9HAY2 307 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 NRN1Q9NPD7 142 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 ACOXLQ9NUZ1 547 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 DCDC2Q9UHG0 476 aa2.23□□□□□ -2.05
CLK1-204ENST00000432425 ENPP5Q9UJA9 477 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms