RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 OR1S2Q8NGQ3 325 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 OR4A16Q8NH70 328 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 KCNG3Q8TAE7 436 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 DPH1Q9BZG8 443 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 MMP28Q9H239 520 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 RNF150Q9ULK6 438 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 FAM227AF5H4B4 570 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 CD79AP11912 226 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 DCTP40126 519 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 ETV5P41161 510 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 CDKN2DP55273 166 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 RPS18P62269 152 aaKnown RBP13.54□□□□□ -0.24
PTPN13-203ENST00000427191 FIGLAQ6QHK4 219 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 FRS2Q8WU20 508 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 C4orf36Q96KX1 117 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 C4orf47A7E2U8 309 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 FUT1P19526 365 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 NKX2-5P52952 324 aaPredicted RBP13.54□□□□□ -0.24
PTPN13-203ENST00000427191 TMEM71Q6P5X7 295 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 NLRP8Q86W28 1048 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 BPIFA2Q96DR5 249 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 DUSP23Q9BVJ7 150 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 OR11A1Q9GZK7 315 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 BABAM2Q9NXR7 383 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 NUP188Q5SRE5 1749 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 UBL3O95164 117 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 DDAH2O95865 285 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 RABGGTBP53611 331 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 GLB1P16278 677 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 SLC46A3Q7Z3Q1 461 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 KCNRGQ8N5I3 272 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 MED30Q96HR3 178 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 BOKQ9UMX3 212 aaPredicted RBP13.54□□□□□ -0.24
PTPN13-203ENST00000427191 KIR2DS5A0A0G2JLQ3 304 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 A0A0G2JNG1 304 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 KIR2DS3K7RE56 304 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 MRPS34P82930 218 aaKnown RBP13.54□□□□□ -0.24
PTPN13-203ENST00000427191 KIR2DS5Q14953 304 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 CLEC1AQ8NC01 280 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 DMRT3Q9NQL9 472 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 RNF24Q9Y225 148 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 PTNP21246 168 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 EPHA4P54764 986 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 NHLRC2Q8NBF2 726 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 PEX11GQ96HA9 241 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 RASD1Q9Y272 281 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 ARNTLO00327 626 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 SEC14L5O43304 696 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 SDC3O75056 442 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 IDUAP35475 653 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 OPRD1P41143 372 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 INHBCP55103 352 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 RANP62826 216 aaKnown RBP13.54□□□□□ -0.24
PTPN13-203ENST00000427191 AKR1C1Q04828 323 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 RNLSQ5VYX0 342 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 OR10K2Q6IF99 312 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 FAM122BQ7Z309 247 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 SLC51BQ86UW2 128 aa13.54□□□□□ -0.24
PTPN13-203ENST00000427191 FAM71F1Q96KD3 344 aaPredicted RBP13.54□□□□□ -0.24
PTPN13-203ENST00000427191 FEZF1A0PJY2 475 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 ZNF891A8MT65 544 aaPredicted RBP13.53□□□□□ -0.24
PTPN13-203ENST00000427191 MCRIP1C9JLW8 97 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 ADAM12O43184 909 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 F2P00734 622 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 SBK2P0C263 348 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 LAMP1P11279 417 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 EMP2P54851 167 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 RAC1P63000 192 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 SH3BP2P78314 561 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 PHYHD1Q5SRE7 291 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 SSX9Q7RTT3 188 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 FAM58AQ8N1B3 248 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 PARP16Q8N5Y8 322 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 SEC14L6B5MCN3 397 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 GPR18Q14330 331 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 OR4D1Q15615 310 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 SIAH1Q8IUQ4 282 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 PRR18Q8N4B5 295 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 ISG20Q96AZ6 181 aaKnown RBP13.53□□□□□ -0.24
PTPN13-203ENST00000427191 NTMT1Q9BV86 223 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 SLC23A2Q9UGH3 650 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 ADAM29Q9UKF5 820 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 CBY1Q9Y3M2 126 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 NME4O00746 187 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 CAPNS1P04632 268 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 GSK3AP49840 483 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 CST6Q15828 149 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 PXT1Q8NFP0 134 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 IGSF21Q96ID5 467 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 GALR3O60755 368 aaPredicted RBP13.53□□□□□ -0.24
PTPN13-203ENST00000427191 BPIFB2Q8N4F0 458 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 DTWD1Q8N5C7 304 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 SLC41A2Q96JW4 573 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 RBFOX1Q9NWB1 397 aaKnown RBP13.53□□□□□ -0.24
PTPN13-203ENST00000427191 C3orf38Q5JPI3 329 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 IER3IP1Q9Y5U9 82 aa13.53□□□□□ -0.24
PTPN13-203ENST00000427191 A0A1W2PP55 124 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 A0A1W2PQU0 124 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 AADACP22760 399 aa13.52□□□□□ -0.24
PTPN13-203ENST00000427191 GIPRP48546 466 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms