RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ARID1BQ8NFD5 2236 aaPredicted RBP9.84□□□□□ -0.83
CUX1-205ENST00000425244 OR52R1Q8NGF1 315 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 FAM174AQ8TBP5 190 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 CNOT9Q92600 299 aaKnown RBP9.84□□□□□ -0.83
CUX1-205ENST00000425244 FYTTD1Q96QD9 318 aaKnown RBP9.84□□□□□ -0.83
CUX1-205ENST00000425244 TMEM27Q9HBJ8 222 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 RANGRFQ9HD47 186 aaPredicted RBP9.84□□□□□ -0.83
CUX1-205ENST00000425244 FBXL4Q9UKA2 621 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 TP53BP1Q12888 1972 aaPredicted RBP9.84□□□□□ -0.83
CUX1-205ENST00000425244 ADAMTS9Q9P2N4 1935 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 RIIAD1A6NNX1 92 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 C2orf74A8MZ97 194 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 E9PI62 339 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 J3QLW9 94 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 HCRTR1O43613 425 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 PIAS2O75928 621 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 RCBTB2O95199 551 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 ATP1B1P05026 303 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 CTSBP07858 339 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 ZNF19P17023 458 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 TBXA2RP21731 343 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 NNATQ16517 81 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 AMZ1Q400G9 498 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 PMS2CLQ68D20 193 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 ZNF57Q68EA5 555 aaPredicted RBP9.84□□□□□ -0.83
CUX1-205ENST00000425244 DGAT2L6Q6ZPD8 337 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 LILRB1Q8NHL6 650 aaPredicted RBP9.84□□□□□ -0.83
CUX1-205ENST00000425244 PMM1Q92871 262 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 TP53INP1Q96A56 240 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 COQ7Q99807 217 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 SMOC1Q9H4F8 434 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 LYRM4Q9HD34 91 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 TRIM36Q9NQ86 728 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 KLHL1Q9NR64 748 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 DUSP22Q9NRW4 184 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 ASB6Q9NWX5 421 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 RP1P56715 2156 aa9.84□□□□□ -0.83
CUX1-205ENST00000425244 A0A0B4J293 547 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 FAM240BA0A1B0GVZ2 78 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 HMX3A6NHT5 357 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 CYR61O00622 381 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 PLOD3O60568 738 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 RFPL3O75679 317 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 DDOSTP39656 456 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 RPS5P46782 204 aaKnown RBP9.83□□□□□ -0.84
CUX1-205ENST00000425244 EVX1P49640 407 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 CRMP1Q14194 572 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 PRICKLE4Q2TBC4 344 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 CCDC58Q4VC31 144 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 PAMR1Q6UXH9 720 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 RPTNQ6XPR3 784 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 NR2C2APQ86WQ0 139 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 RDH10Q8IZV5 341 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 GHDCQ8N2G8 530 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 CADM2Q8N3J6 435 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 SLC25A45Q8N413 288 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 LNX2Q8N448 690 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 OR5W2Q8NH69 310 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 OR4C6Q8NH72 309 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 BAHD1Q8TBE0 780 aaPredicted RBP9.83□□□□□ -0.84
CUX1-205ENST00000425244 PTP4A1Q93096 173 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 KIAA1143Q96AT1 154 aaPredicted RBP9.83□□□□□ -0.84
CUX1-205ENST00000425244 RNF31Q96EP0 1072 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 SPOCK3Q9BQ16 436 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 WACQ9BTA9 647 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 OR2B2Q9GZK3 357 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 HDHD2Q9H0R4 259 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 KCNN2Q9H2S1 579 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 PPP1R3EQ9H7J1 279 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 MEPEQ9NQ76 525 aaPredicted RBP9.83□□□□□ -0.84
CUX1-205ENST00000425244 PRMT8Q9NR22 394 aaPredicted RBP9.83□□□□□ -0.84
CUX1-205ENST00000425244 NLKQ9UBE8 527 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 EXTL2Q9UBQ6 330 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 PCDH15Q96QU1 1955 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 CENPBD1B2RD01 187 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 LMO7DNF2Z398 122 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 RGS13O14921 159 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 LYPD3O95274 346 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 PRKAR1AP10644 381 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 ELK1P19419 428 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 RPS4Y1P22090 263 aaKnown RBP9.83□□□□□ -0.84
CUX1-205ENST00000425244 SHC1P29353 583 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 ACVR1BP36896 505 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 RAB25P57735 213 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 E2F1Q01094 437 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 SNAP47Q5SQN1 464 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 OOSP2Q86WS3 158 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 CA13Q8N1Q1 262 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 ZNF655Q8N720 491 aaPredicted RBP9.83□□□□□ -0.84
CUX1-205ENST00000425244 DTWD2Q8NBA8 298 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 OR4N2Q8NGD1 307 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 OR9A4Q8NGU2 314 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 SLC7A6Q92536 515 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 KISS1RQ969F8 398 aaPredicted RBP9.83□□□□□ -0.84
CUX1-205ENST00000425244 C4orf36Q96KX1 117 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 IER2Q9BTL4 223 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 PPIL3Q9H2H8 161 aaKnown RBP9.83□□□□□ -0.84
CUX1-205ENST00000425244 PAQR5Q9NXK6 330 aaPredicted RBP9.83□□□□□ -0.84
CUX1-205ENST00000425244 POLHQ9Y253 713 aa9.83□□□□□ -0.84
CUX1-205ENST00000425244 A0A0G2JMP0 313 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms