RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 SLC1A3P43003 542 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 COPZ1P61923 177 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 RASGEF1BQ0VAM2 473 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 EPS8Q12929 822 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 MAPK11Q15759 364 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 ZSWIM7Q19AV6 140 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 PAGE3Q5JUK9 113 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 GCNT6Q5T4J0 391 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 TMPPEQ6ZT21 453 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 ZNF550Q7Z398 422 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 BBS10Q8TAM1 723 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 NINJ1Q92982 152 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 MAL2Q969L2 176 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 DNAJA3Q96EY1 480 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 ZC3HAV1LQ96H79 300 aaKnown RBP11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 WFIKKN1Q96NZ8 548 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 PSD2Q9BQI7 771 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 SLC25A37Q9NYZ2 338 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 ST6GALNAC2Q9UJ37 374 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 LEF1Q9UJU2 399 aaPredicted RBP11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 HDGFL3Q9Y3E1 203 aa11.34□□□□□ -0.59
HMGN1P4-201ENST00000419500 HEATR5AQ86XA9 2040 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 MAP1AP78559 2803 aaPredicted RBP11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 TMED7-TICAM2A0A0A6YYA0 188 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 CYTIPO60759 359 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 PMS2P2O95744 297 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 HRGP04196 525 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 GKN3PP0CG01 181 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 BMP2P12643 396 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 PPP3CBP16298 524 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 DNASE1P24855 282 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 TACR3P29371 465 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 CLK1P49759 484 aaKnown RBP11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 ZNF311Q5JNZ3 666 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 PRAMEF8Q5VWM4 474 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 PRAMEF7Q5VXH5 474 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 ANKRD34AQ69YU3 496 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 TFAP2EQ6VUC0 442 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 NUFIP2Q7Z417 695 aaKnown RBP11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 MSRB3Q8IXL7 192 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 CADM2Q8N3J6 435 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 NFKBIDQ8NI38 313 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 ARL5BQ96KC2 179 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 SPATA9Q9BWV2 254 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 OR11A1Q9GZK7 315 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 BCO1Q9HAY6 547 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 SLC52A3Q9NQ40 469 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 ZNF446Q9NWS9 450 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 EMC3Q9P0I2 261 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 VAPAQ9P0L0 249 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 C6orf203Q9P0P8 240 aaPredicted RBP11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 SLAMF8Q9P0V8 285 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 TMED7Q9Y3B3 224 aa11.33□□□□□ -0.6
HMGN1P4-201ENST00000419500 DNPH1O43598 174 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 PGM3O95394 542 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 ARAFP10398 606 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 CD1EP15812 388 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 CRYGSP22914 178 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 CXCR1P25024 350 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 MAP2K6P52564 334 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 ART1P52961 327 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 OR2B6P58173 313 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 KEAP1Q14145 624 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 METTL21CQ5VZV1 264 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 ABLIM2Q6H8Q1 611 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 WBP2NLQ6ICG8 309 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 REEP3Q6NUK4 255 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 PAMR1Q6UXH9 720 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 STAC2Q6ZMT1 411 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 DHDDSQ86SQ9 333 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 MTDHQ86UE4 582 aaKnown RBP11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 ADGRG3Q86Y34 549 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 KRT73Q86Y46 540 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 PIGXQ8TBF5 258 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 PIK3IP1Q96FE7 263 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 SPATA5L1Q9BVQ7 753 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 TMEM120AQ9BXJ8 343 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 ACTR6Q9GZN1 396 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 LIME1Q9H400 295 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 BCL2L10Q9HD36 194 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 CCM2LQ9NUG4 571 aaPredicted RBP11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 MRGBPQ9NV56 204 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 TMEM181Q9P2C4 612 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 OSGIN1Q9UJX0 560 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 PLEKHA6Q9Y2H5 1048 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 GPR52Q9Y2T5 361 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 NDUFAF1Q9Y375 327 aa11.32□□□□□ -0.6
HMGN1P4-201ENST00000419500 TRBV5-3A0A0A0MS03 114 aa11.31□□□□□ -0.6
HMGN1P4-201ENST00000419500 TMEM72A0PK05 275 aa11.31□□□□□ -0.6
HMGN1P4-201ENST00000419500 ZNF208O43345 1280 aa11.31□□□□□ -0.6
HMGN1P4-201ENST00000419500 EIF1BO60739 113 aaKnown RBP11.31□□□□□ -0.6
HMGN1P4-201ENST00000419500 RAF1P04049 648 aa11.31□□□□□ -0.6
HMGN1P4-201ENST00000419500 VIMP08670 466 aaKnown RBP11.31□□□□□ -0.6
HMGN1P4-201ENST00000419500 ETS2P15036 469 aa11.31□□□□□ -0.6
HMGN1P4-201ENST00000419500 KLK2P20151 261 aa11.31□□□□□ -0.6
HMGN1P4-201ENST00000419500 PSMB1P20618 241 aaKnown RBP11.31□□□□□ -0.6
HMGN1P4-201ENST00000419500 IL32P24001 234 aa11.31□□□□□ -0.6
HMGN1P4-201ENST00000419500 IDUAP35475 653 aa11.31□□□□□ -0.6
HMGN1P4-201ENST00000419500 IST1P53990 364 aa11.31□□□□□ -0.6
HMGN1P4-201ENST00000419500 CDK6Q00534 326 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms