RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 PSME3P61289 254 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 RPP30P78346 268 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 MPP1Q00013 466 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 PMP22Q01453 160 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 BMPR2Q13873 1038 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 DAZAP2Q15038 168 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 TOMM34Q15785 309 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 KNOP1Q1ED39 458 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 HYAL4Q2M3T9 481 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 HFEQ30201 348 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 FBLN7Q53RD9 439 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 TOR1AIP1Q5JTV8 583 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 CDKL4Q5MAI5 379 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 SLC25A25Q6KCM7 469 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 C16orf89Q6UX73 402 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 DLEU7Q6UYE1 221 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 FAM92BQ6ZTR7 304 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 SH2D5Q6ZV89 423 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 TMPRSS11FQ6ZWK6 438 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 SLC26A9Q7LBE3 791 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 CBWD2Q8IUF1 395 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 CCDC71Q8IV32 467 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 SKA3Q8IX90 412 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 STPG2Q8N412 459 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 RYBPQ8N488 228 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 SLC25A41Q8N5S1 370 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 FAM47BQ8NA70 645 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 OR13J1Q8NGT2 312 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 OR9A1PQ8NGU1 263 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 OR6K2Q8NGY2 324 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 STT3BQ8TCJ2 826 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 DYNC2LI1Q8TCX1 351 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 CREB3L4Q8TEY5 395 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 ZFP90Q8TF47 636 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 DEDD2Q8WXF8 326 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 VOPP1Q96AW1 172 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 EXOSC8Q96B26 276 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 REPS1Q96D71 796 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 ECHDC3Q96DC8 303 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 SLC41A2Q96JW4 573 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 UBXN10Q96LJ8 280 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 PPM1MQ96MI6 270 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 RDH12Q96NR8 316 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 KCNC2Q96PR1 638 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 ACCSQ96QU6 501 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 OR2M4Q96R27 311 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 SSX3Q99909 188 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 TRIM51Q9BSJ1 452 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 TUBGCP2Q9BSJ2 902 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 TMED9Q9BVK6 235 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 MRPL37Q9BZE1 423 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 PCDHAC1Q9H158 963 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 RHBGQ9H310 441 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 TRABDQ9H4I3 376 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 KLHL31Q9H511 634 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 ESRP2Q9H6T0 727 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 NT5MQ9NPB1 228 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 BLOC1S4Q9NUP1 217 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 IMPAD1Q9NX62 359 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 SPHK1Q9NYA1 384 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 ZNF224Q9NZL3 707 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 CD274Q9NZQ7 290 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 COPZ2Q9P299 210 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 PHF11Q9UIL8 331 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 DHRS7Q9Y394 339 aa5.02□□□□□ -1.61
ECHDC1-206ENST00000417628 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.02□□□□□ -1.611e-8■■■■■ 34.9
ECHDC1-206ENST00000417628 LOC100506127A0A0U1RQW1 187 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 NCF1BA6NI72 391 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 AGAP5A6NIR3 686 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 SDR42E2A6NKP2 422 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 NCF1CA8MVU1 366 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 A8MXK9 166 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 MCIDASD6RGH6 385 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 E5RI56 91 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 H7C0S8 307 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 M0QZK8 103 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 UBE2CO00762 179 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 SEC14L5O43304 696 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 AKR7A2O43488 359 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 CHP2O43745 196 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 MITFO75030 526 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 SCO1O75880 301 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 SUPT7LO94864 414 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 ANGPTL1O95841 491 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 PEX11BO96011 259 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 JCHAINP01591 159 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 APRTP07741 180 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 ELANEP08246 267 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 CHRM5P08912 532 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 MYL2P10916 166 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 DAOP14920 347 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 PAX1P15863 534 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 AMD1P17707 334 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 CA4P22748 312 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 ATP5A1P25705 553 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 GJC1P36383 396 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 RFC3P40938 356 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 GRIA1P42261 906 aa5.01□□□□□ -1.61
ECHDC1-206ENST00000417628 CRATP43155 626 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms