RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 ADAM18Q9Y3Q7 739 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 LOC105371267A0A1B0GV96 52 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 MCIDASD6RGH6 385 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 ZNF593O00488 134 aaPredicted RBP9.08□□□□□ -0.96
SS18-203ENST00000415083 SLC31A1O15431 190 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 UGT2B7P16662 529 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 C5AR1P21730 350 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 PYCR1P32322 319 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 ATP12AP54707 1039 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 PSG6Q00889 435 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 IKZF1Q13422 519 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 TMEM44Q2T9K0 475 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 TEX261Q6UWH6 196 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 Q6ZTK2 550 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 GLRX5Q86SX6 157 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 FRMD1Q8N878 549 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 TEX19Q8NA77 164 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 OR11G2Q8NGC1 345 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 RPS4Y2Q8TD47 263 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 TTC9Q92623 222 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 TSACCQ96A04 125 aaPredicted RBP9.08□□□□□ -0.96
SS18-203ENST00000415083 OR14A2Q96R54 314 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 RAB11FIP5Q9BXF6 653 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 TRIM36Q9NQ86 728 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 ING3Q9NXR8 418 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 KLHL28Q9NXS3 571 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 DNAJB12Q9NXW2 375 aaKnown RBP9.08□□□□□ -0.96
SS18-203ENST00000415083 HAO2Q9NYQ3 351 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 SLC13A4Q9UKG4 626 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 MGAT4AQ9UM21 535 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 TMEM5Q9Y2B1 443 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 U3KQ87 197 aa9.08□□□□□ -0.96
SS18-203ENST00000415083 A0A1B0GWA3 101 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 A0A1W2PQF6 199 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 OR2W5A6NFC9 320 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 PRR23D1E9PI22 279 aaPredicted RBP9.07□□□□□ -0.96
SS18-203ENST00000415083 NOS1APO75052 506 aaPredicted RBP9.07□□□□□ -0.96
SS18-203ENST00000415083 PRR23D2P0DMB1 279 aaPredicted RBP9.07□□□□□ -0.96
SS18-203ENST00000415083 MMP15P51511 669 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 AMZ1Q400G9 498 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 RNF113BQ8IZP6 322 aaKnown RBP9.07□□□□□ -0.96
SS18-203ENST00000415083 FAM109AQ8N4B1 249 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 SDR9C7Q8NEX9 313 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 FAM3CQ92520 227 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 KCTD12Q96CX2 325 aaKnown RBP9.07□□□□□ -0.96
SS18-203ENST00000415083 SORCS2Q96PQ0 1159 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 TMEM168Q9H0V1 697 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 MRPL15Q9P015 296 aaKnown RBP9.07□□□□□ -0.96
SS18-203ENST00000415083 SERTAD3Q9UJW9 196 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 SLC35A3Q9Y2D2 325 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 CLDN16Q9Y5I7 305 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 CIB4A0PJX0 185 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 LRRC72A6NJI9 287 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 DUXAA6NLW8 204 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 MT-ND5P03915 603 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 SULT1A3P0DMM9 295 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 SULT1A4P0DMN0 295 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 PSMB10P40306 273 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 NRG3P56975 720 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 RPS15AP62244 130 aaKnown RBP9.07□□□□□ -0.96
SS18-203ENST00000415083 KRT33BQ14525 404 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 TMEM196Q5HYL7 178 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 UNQ9370/PRO34162Q6UXP9 181 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 KRT74Q7RTS7 529 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 CMIPQ8IY22 773 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 ZSCAN1Q8NBB4 408 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 TOR1AIP2Q8NFQ8 470 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 OR14C36Q8NHC7 312 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 LCN9Q8WX39 176 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 FGF14Q92915 247 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 BMFQ96LC9 184 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 SERINC2Q96SA4 455 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 GPR174Q9BXC1 333 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 NARFLQ9H6Q4 476 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 BEX1Q9HBH7 125 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 STMN3Q9NZ72 180 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 OR6C2Q9NZP2 312 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 H2AFY2Q9P0M6 372 aaPredicted RBP9.07□□□□□ -0.96
SS18-203ENST00000415083 EIF3KQ9UBQ5 218 aaKnown RBP9.07□□□□□ -0.96
SS18-203ENST00000415083 AK6Q9Y3D8 172 aaKnown RBP9.07□□□□□ -0.96
SS18-203ENST00000415083 PCNX3Q9H6A9 2034 aa9.07□□□□□ -0.96
SS18-203ENST00000415083 SYNDIG1LA6NDD5 238 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 GPR171O14626 319 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 PRKNO60260 465 aaPredicted RBP9.06□□□□□ -0.96
SS18-203ENST00000415083 SELENOFO60613 162 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 STX11O75558 287 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 WISP1O95388 367 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 DBIP07108 87 aaKnown RBP9.06□□□□□ -0.96
SS18-203ENST00000415083 UCHL1P09936 223 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 ZNF250P15622 560 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 SSTR2P30874 369 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 RPS21P63220 83 aaKnown RBP9.06□□□□□ -0.96
SS18-203ENST00000415083 MRPL28Q13084 256 aaKnown RBP9.06□□□□□ -0.96
SS18-203ENST00000415083 CDK5R1Q15078 307 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 ZNF684Q5T5D7 378 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 BIVMQ86UB2 503 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 CMTM4Q8IZR5 234 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 SLC44A3Q8N4M1 653 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 ZNF680Q8NEM1 530 aa9.06□□□□□ -0.96
SS18-203ENST00000415083 OR6C4Q8NGE1 309 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms