RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 OR6K3Q8NGY3 331 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 IKZF5Q9H5V7 419 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 ARMCX1Q9P291 453 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 KLHL9Q9P2J3 617 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 KCNN3Q9UGI6 736 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 TMED7Q9Y3B3 224 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 A0A1W2PNR3 127 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 DNPH1O43598 174 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 SNX3O60493 162 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 BCAS1O75363 584 aaPredicted RBP13.17□□□□□ -0.3
CHD1-202ENST00000414220 AQP8O94778 261 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 CD8BP10966 210 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 COX4I1P13073 169 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 CCNA2P20248 432 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 AQP1P29972 269 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 KIR2DL3P43628 341 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 SORDQ00796 357 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 ZNF239Q16600 458 aaKnown RBP13.17□□□□□ -0.3
CHD1-202ENST00000414220 NET1Q7Z628 596 aaPredicted RBP13.17□□□□□ -0.3
CHD1-202ENST00000414220 ADGRG3Q86Y34 549 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 CLIP4Q8N3C7 705 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 ROBO4Q8WZ75 1007 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 HOPXQ9BPY8 73 aaPredicted RBP13.17□□□□□ -0.3
CHD1-202ENST00000414220 ZNF559Q9BR84 538 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 TRIM8Q9BZR9 551 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 TRIM2Q9C040 744 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 TMEM27Q9HBJ8 222 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 NPDC1Q9NQX5 325 aaPredicted RBP13.17□□□□□ -0.3
CHD1-202ENST00000414220 ELOVL5Q9NYP7 299 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 JKAMPQ9P055 326 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 NDRG3Q9UGV2 375 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 OSGIN1Q9UJX0 560 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 TRAPPC4Q9Y296 219 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 ARHGAP21Q5T5U3 1957 aa13.17□□□□□ -0.3
CHD1-202ENST00000414220 MED12Q93074 2177 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 TUBAL3A6NHL2 446 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 A8MXE2 369 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 AIM2O14862 343 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 EIF1BO60739 113 aaKnown RBP13.16□□□□□ -0.3
CHD1-202ENST00000414220 SS18L1O75177 396 aaPredicted RBP13.16□□□□□ -0.3
CHD1-202ENST00000414220 TNFSF13O75888 250 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 PMS2P2O95744 297 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 IGFBP2P18065 325 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 DRD4P21917 467 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 SHC1P29353 583 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 PCGF2P35227 344 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 ACAA2P42765 397 aaKnown RBP13.16□□□□□ -0.3
CHD1-202ENST00000414220 KIR2DL2P43627 348 aaPredicted RBP13.16□□□□□ -0.3
CHD1-202ENST00000414220 DIO1P49895 249 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 RGS8P57771 180 aaPredicted RBP13.16□□□□□ -0.3
CHD1-202ENST00000414220 SLC35A1P78382 337 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 SELPLGQ14242 412 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 ADRM1Q16186 407 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 VMACQ2NL98 169 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 RANBP3LQ86VV4 465 aaPredicted RBP13.16□□□□□ -0.3
CHD1-202ENST00000414220 RNF128Q8TEB7 428 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 DNAJA4Q8WW22 397 aaPredicted RBP13.16□□□□□ -0.3
CHD1-202ENST00000414220 RCN3Q96D15 328 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 STARD4Q96DR4 205 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 C14orf79Q96F83 325 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 NAA11Q9BSU3 229 aaPredicted RBP13.16□□□□□ -0.3
CHD1-202ENST00000414220 TAPBPLQ9BX59 468 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 ADAM19Q9H013 955 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 COQ10BQ9H8M1 238 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 TMEM181Q9P2C4 612 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 ARL2BPQ9Y2Y0 163 aa13.16□□□□□ -0.3
CHD1-202ENST00000414220 PCNX3Q9H6A9 2034 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 A8MVM7 634 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 M0QX08 132 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 CASKO14936 926 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 DCTN3O75935 186 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 C8BP07358 591 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 YES1P07947 543 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 CPOXP36551 454 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 PCYT1AP49585 367 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 GYS2P54840 703 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 OR2B6P58173 313 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 VEZF1Q14119 521 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 VWA1Q6PCB0 445 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 BEND4Q6ZU67 534 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 BTLAQ7Z6A9 289 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 PTOV1Q86YD1 416 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 ZZZ3Q8IYH5 903 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 C10orf111Q8N326 155 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 POU5F2Q8N7G0 328 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 ACBD4Q8NC06 268 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 OR52E4Q8NGH9 312 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 SRXN1Q9BYN0 137 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 POTEKPQ9BYX7 375 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 C12orf10Q9HB07 376 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 PLSCR4Q9NRQ2 329 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 EMC3Q9P0I2 261 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 TESQ9UGI8 421 aaKnown RBP13.15□□□□□ -0.3
CHD1-202ENST00000414220 CLEC4AQ9UMR7 237 aa13.15□□□□□ -0.3
CHD1-202ENST00000414220 TMEM72A0PK05 275 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 ELOA3DA6NLF2 546 aaPredicted RBP13.14□□□□□ -0.31
CHD1-202ENST00000414220 ADAM11O75078 769 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 MFN2O95140 757 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 GPIP06744 558 aa13.14□□□□□ -0.31
CHD1-202ENST00000414220 PNMTP11086 282 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms