RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 BABAM2Q9NXR7 383 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 PLEKHM1Q9Y4G2 1056 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 TMEM269A0A1B0GVZ9 245 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 LRIT2A6NDA9 550 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 POM121BA6NF01 834 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 K7ESM1 405 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 FBP2O00757 339 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 SMAD9O15198 467 aaKnown RBP16.07■□□□□ 0.16
PHRF1-202ENST00000413872 EIF4E2O60573 245 aaKnown RBP16.07■□□□□ 0.16
PHRF1-202ENST00000413872 NPR2P20594 1047 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 LIM2P55344 173 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 NFATC3Q12968 1075 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 CHDHQ8NE62 594 aaPredicted RBP16.07■□□□□ 0.16
PHRF1-202ENST00000413872 SLC25A43Q8WUT9 341 aaPredicted RBP16.07■□□□□ 0.16
PHRF1-202ENST00000413872 TXNDC15Q96J42 360 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 MICU1Q9BPX6 476 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 TMEM30AQ9NV96 361 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 TBCCD1Q9NVR7 557 aa16.07■□□□□ 0.16
PHRF1-202ENST00000413872 DCDC2BA2VCK2 349 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 ZNF701M0R085 212 aaPredicted RBP16.06■□□□□ 0.16
PHRF1-202ENST00000413872 GPR19Q15760 415 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 PRAMEF20Q5VT98 475 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 TMEM150AQ86TG1 271 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 ZNF454Q8N9F8 522 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 WBP2Q969T9 261 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 ZNF583Q96ND8 569 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 TMED7-TICAM2A0A0A6YYA0 188 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 LCKP06239 509 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 NUDT7P0C024 238 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 PPP5CP53041 499 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 AIMP2Q13155 320 aaKnown RBP16.06■□□□□ 0.16
PHRF1-202ENST00000413872 ACSM3Q53FZ2 586 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 SENP5Q96HI0 755 aaPredicted RBP16.06■□□□□ 0.16
PHRF1-202ENST00000413872 ELF4Q99607 663 aaPredicted RBP16.06■□□□□ 0.16
PHRF1-202ENST00000413872 DYNLRB1Q9NP97 96 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 LTB4R2Q9NPC1 389 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 DUSP22Q9NRW4 184 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 TMED7Q9Y3B3 224 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 TMEM184BQ9Y519 407 aaPredicted RBP16.06■□□□□ 0.16
PHRF1-202ENST00000413872 AGAP5A6NIR3 686 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 C2CD4DB7Z1M9 353 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 RP2O75695 350 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 NCS1P62166 190 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 CCSMST1Q4G0I0 132 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 PXKQ7Z7A4 578 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 PAPPAQ13219 1627 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 SCN9AQ15858 1988 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 CHRM4P08173 479 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 ARNTP27540 789 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 SLC19A1P41440 591 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 VASNQ6EMK4 673 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 RPS19BP1Q86WX3 136 aaKnown RBP16.06■□□□□ 0.16
PHRF1-202ENST00000413872 ELMOD2Q8IZ81 293 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 DCBLD2Q96PD2 775 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 PLEKHJ1Q9NW61 149 aa16.06■□□□□ 0.16
PHRF1-202ENST00000413872 PRAMEF25A6NGN4 478 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 M0R233 179 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 TP53P04637 393 aaPredicted RBP16.05■□□□□ 0.16
PHRF1-202ENST00000413872 CAMK2DQ13557 499 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 SELPLGQ14242 412 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 RETREG3Q86VR2 466 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 ADAMTS14Q8WXS8 1223 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 SPIN2AQ99865 258 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 SPIN2BQ9BPZ2 258 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 DAPP1Q9UN19 280 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 METTL15A6NJ78 407 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 PHC1P78364 1004 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 DMWDQ09019 674 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 ZNF691Q5VV52 312 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 GSG1LQ6UXU4 331 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 MS4A6EQ96DS6 147 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 MAELQ96JY0 434 aaKnown RBP16.05■□□□□ 0.16
PHRF1-202ENST00000413872 TREM1Q9NP99 234 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 C14orf119Q9NWQ9 140 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 NOSIPQ9Y314 301 aaKnown RBP16.05■□□□□ 0.16
PHRF1-202ENST00000413872 HSPB11Q9Y547 144 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 PLPP1O14494 284 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 NSA2O95478 260 aaKnown RBP16.05■□□□□ 0.16
PHRF1-202ENST00000413872 ENPP1P22413 925 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 ATXN7L3Q14CW9 347 aaPredicted RBP16.05■□□□□ 0.16
PHRF1-202ENST00000413872 PPA1Q15181 289 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 TBCEQ15813 527 aaPredicted RBP16.05■□□□□ 0.16
PHRF1-202ENST00000413872 RPL22L1Q6P5R6 122 aaKnown RBP16.05■□□□□ 0.16
PHRF1-202ENST00000413872 SYT13Q7L8C5 426 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 TBC1D15Q8TC07 691 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 C1orf198Q9H425 327 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 NIPAL2Q9H841 368 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 SLAMF8Q9P0V8 285 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 GPX2P18283 190 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 PGFP49763 221 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 TMEM196Q5HYL7 178 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 STEAP2Q8NFT2 490 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 CTRCQ99895 268 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 FOXQ1Q9C009 403 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 MAB21L2Q9Y586 359 aa16.05■□□□□ 0.16
PHRF1-202ENST00000413872 A0A1W2PQL4 384 aaPredicted RBP16.04■□□□□ 0.16
PHRF1-202ENST00000413872 GLSO94925 669 aaPredicted RBP16.04■□□□□ 0.16
PHRF1-202ENST00000413872 CSF1P09603 554 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 TAS2R31P59538 309 aa16.04■□□□□ 0.16
PHRF1-202ENST00000413872 GPR176Q14439 515 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms