RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 TCEANCQ8N8B7 351 aa15.67■□□□□ 0.1
PTPRC-206ENST00000413409 ZNF615Q8N8J6 731 aa15.67■□□□□ 0.1
PTPRC-206ENST00000413409 FAM46AQ96IP4 442 aaKnown RBP15.67■□□□□ 0.1
PTPRC-206ENST00000413409 SLC38A2Q96QD8 506 aa15.67■□□□□ 0.1
PTPRC-206ENST00000413409 IL4I1Q96RQ9 567 aa15.67■□□□□ 0.1
PTPRC-206ENST00000413409 PRSS27Q9BQR3 290 aa15.67■□□□□ 0.1
PTPRC-206ENST00000413409 TEX12Q9BXU0 123 aa15.67■□□□□ 0.1
PTPRC-206ENST00000413409 AMBNQ9NP70 447 aa15.67■□□□□ 0.1
PTPRC-206ENST00000413409 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.67■□□□□ 0.1
PTPRC-206ENST00000413409 MED17Q9NVC6 651 aa15.67■□□□□ 0.1
PTPRC-206ENST00000413409 TVP23BQ9NYZ1 205 aa15.67■□□□□ 0.1
PTPRC-206ENST00000413409 DNAJC27Q9NZQ0 273 aa15.67■□□□□ 0.1
PTPRC-206ENST00000413409 SELENONQ9NZV5 590 aa15.67■□□□□ 0.1
PTPRC-206ENST00000413409 ZNF223Q9UK11 482 aaPredicted RBP15.67■□□□□ 0.1
PTPRC-206ENST00000413409 PKDREJQ9NTG1 2253 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 IGKV3D-11A0A0A0MRZ8 115 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 NPIPA5A0A0B4J1W7 369 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 C21orf140B9A014 251 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 PRSS44E7EML9 344 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 NPIPA7E9PJI5 369 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 M0R082 166 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 DSCR3O14972 297 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 ZG16O60844 167 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 CDC123O75794 336 aaPredicted RBP15.66■□□□□ 0.1
PTPRC-206ENST00000413409 TIAF1O95411 115 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 CLPSP04118 112 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 NPIPA8P0DM63 369 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 DBTP11182 482 aaKnown RBP15.66■□□□□ 0.1
PTPRC-206ENST00000413409 CD36P16671 472 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 ZNF182P17025 639 aaPredicted RBP15.66■□□□□ 0.1
PTPRC-206ENST00000413409 MAOAP21397 527 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 LSM11P83369 360 aaKnown RBP eCLIP15.66■□□□□ 0.1
PTPRC-206ENST00000413409 DCTN2Q13561 401 aaKnown RBP15.66■□□□□ 0.1
PTPRC-206ENST00000413409 KCNAB1Q14722 419 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 SPCS2Q15005 226 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 NCF4Q15080 339 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 SLC46A3Q7Z3Q1 461 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 ZAR1Q86SH2 424 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 CYP4Z2PQ8N1L4 340 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 METTL27Q8N6F8 245 aaPredicted RBP15.66■□□□□ 0.1
PTPRC-206ENST00000413409 OR8D4Q8NGM9 314 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 OR1L3Q8NH93 324 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 TBC1D15Q8TC07 691 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 TMEM163Q8TC26 289 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 TMEM255BQ8WV15 326 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 DTNBP1Q96EV8 351 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 CNPPD1Q9BV87 410 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 TSSK6Q9BXA6 273 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 PLA2G12AQ9BZM1 189 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 OR10A5Q9H207 317 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 CNIH4Q9P003 139 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 ERVK-19Q9WJR5 959 aa15.66■□□□□ 0.1
PTPRC-206ENST00000413409 SNTNA6NMZ2 147 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 PRKYO43930 277 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 PTHP01270 115 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 IGKV1D-16P01601 117 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 PRG2P13727 222 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 SEPHS1P49903 392 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 RHAGQ02094 409 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 FGFBP1Q14512 234 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 IL11RAQ14626 422 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 SYT14P1Q58G82 188 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 PDZK1Q5T2W1 519 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 ACSM5Q6NUN0 579 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 ZNF550Q7Z398 422 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 GPR135Q8IZ08 494 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 C16orf52Q8NHV5 167 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 TMEM239Q8WW34 195 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 TMEM80Q96HE8 168 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 HS6ST2Q96MM7 605 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 TRIM2Q9C040 744 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 DSN1Q9H410 356 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 EGLN3Q9H6Z9 239 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 TMEM27Q9HBJ8 222 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 TBC1D23Q9NUY8 699 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 MRPS18AQ9NVS2 196 aaKnown RBP15.65■□□□□ 0.1
PTPRC-206ENST00000413409 DNAJB12Q9NXW2 375 aaKnown RBP15.65■□□□□ 0.1
PTPRC-206ENST00000413409 IL20Q9NYY1 176 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 CFL2Q9Y281 166 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 DTX4Q9Y2E6 619 aa15.65■□□□□ 0.1
PTPRC-206ENST00000413409 SCN2AQ99250 2005 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 A0A0B4J2E0 115 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 A0A1B0GX12 115 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 KDM4EB2RXH2 506 aaPredicted RBP15.64■□□□□ 0.09
PTPRC-206ENST00000413409 HRKO00198 91 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 PRODHO43272 600 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 CHP2O43745 196 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 DYRK3O43781 588 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 PIP5K1CO60331 668 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 CLPXO76031 633 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 IFNA16P05015 189 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 CT45A8P0DMV1 189 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 CT45A9P0DMV2 189 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 FGF5P12034 268 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 FBLP22087 321 aaKnown RBP15.64■□□□□ 0.09
PTPRC-206ENST00000413409 RBM34P42696 430 aaKnown RBP15.64■□□□□ 0.09
PTPRC-206ENST00000413409 ATP12AP54707 1039 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 CTBP2P56545 445 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 PRKCDQ05655 676 aa15.64■□□□□ 0.09
PTPRC-206ENST00000413409 SNAPC1Q16533 368 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms