RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 NLGN2Q8NFZ4 835 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 OR2AK2Q8NG84 335 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 OR6N2Q8NGY6 317 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 CYB5D2Q8WUJ1 264 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 TMEM255BQ8WV15 326 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 GAL3ST3Q96A11 431 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 SEC22AQ96IW7 307 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 NECAB3Q96P71 396 aaPredicted RBP12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 OR7D2Q96RA2 312 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 GAREM1Q9H706 876 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 A4GNTQ9UNA3 340 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 C1QTNF3-AMACRE9PGA6 284 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 GAPDHSO14556 408 aaPredicted RBP12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 AQP8O94778 261 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 HLA-AP01891 365 aaKnown RBP12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 MGMTP16455 207 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 PBX2P40425 430 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 RAE1P78406 368 aaKnown RBP12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 NKPD1Q17RQ9 610 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 TPGS2Q68CL5 300 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 LCTLQ6UWM7 567 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 OVCH1Q7RTY7 1134 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 TMEM200AQ86VY9 491 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 NPAS4Q8IUM7 802 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 SPICQ8N5J4 248 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 CWH43Q9H720 699 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 SIDT1Q9NXL6 827 aaKnown RBP12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 SPHK1Q9NYA1 384 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 KCND3Q9UK17 655 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 FBXL21Q9UKT6 434 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 SLC27A6Q9Y2P4 619 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 TRAV27A0A087WT01 109 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 BLOC1S5-TXNDC5H3BN57 136 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 B3GALT2O43825 422 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 EGFP01133 1207 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 IFNA17P01571 189 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 HPXP02790 462 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 DBIP07108 87 aaKnown RBP12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 FABP1P07148 127 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 LIPCP11150 499 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 S100PP25815 95 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 OR3A2P47893 321 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 TMEM35AQ53FP2 167 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 SPRYD7Q5W111 196 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 SLC25A24Q6NUK1 477 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 ZNF620Q6ZNG0 422 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 NUDT18Q6ZVK8 323 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 CHST14Q8NCH0 376 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 GPR32P1Q8NGA4 272 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 GCDHQ92947 438 aaPredicted RBP12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 ZNF558Q96NG5 402 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 SCGB3A2Q96PL1 93 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 RAB11FIP5Q9BXF6 653 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 EIF5A2Q9GZV4 153 aaKnown RBP12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 PELI2Q9HAT8 420 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 ZFP57Q9NU63 452 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 ZNF281Q9Y2X9 895 aa12.93□□□□□ -0.34
CLTCL1-201ENST00000412649 ZNF736B4DX44 427 aaPredicted RBP12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 EPXP11678 715 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 CD22P20273 847 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 ZNF585AQ6P3V2 769 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 UNQ6126/PRO20091Q6UXV3 157 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 LRRTM4Q86VH4 590 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 OR13C5Q8NGS8 318 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 OR2L2Q8NH16 312 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 SFXN5Q8TD22 340 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 TM4SF18Q96CE8 201 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 SMCO4Q9NRQ5 59 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 USP36Q9P275 1121 aaKnown RBP12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 SBK2P0C263 348 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 ZDHHC11BP0C7U3 371 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 NPPBP16860 134 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 SRMP19623 302 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 TAS2R19P59542 299 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 CYCSP99999 105 aaKnown RBP12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 CRMP1Q14194 572 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 ETFDHQ16134 617 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 LINC00303Q3SY05 128 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 NIPAL3Q6P499 406 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 NKAIN4Q8IVV8 208 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 BPIFCQ8NFQ6 507 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 OR13C2Q8NGS9 318 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 ZNF563Q8TA94 476 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 ZNF461Q8TAF7 563 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 ZNF417Q8TAU3 575 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 RNF141Q8WVD5 230 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 BRI3BPQ8WY22 251 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 FOXRED1Q96CU9 486 aaPredicted RBP12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 SERTM1A2A2V5 107 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 FFAR1O14842 300 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 SLC25A12O75746 678 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 MPC2O95563 127 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 FBXO45P0C2W1 286 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 CD79BP40259 229 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 C21orf58P58505 322 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 OR52B4Q8NGK2 314 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 OR5M1Q8NGP8 315 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 HERVK_113Q902F9 699 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 PHYHIPQ92561 330 aa12.92□□□□□ -0.34
CLTCL1-201ENST00000412649 LMF1Q96S06 567 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms