RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 CDKL1Q00532 357 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 MRPL49Q13405 166 aaKnown RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 KRT33BQ14525 404 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 RPE65Q16518 533 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 GPR33Q49SQ1 333 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 BCL7AQ4VC05 210 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 SOWAHCQ53LP3 525 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 TMEM41BQ5BJD5 291 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 Q5BKY6 102 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 PDSS1Q5T2R2 415 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 HES5Q5TA89 166 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 RSBN1Q5VWQ0 802 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 NKAIN2Q5VXU1 208 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF470Q6ECI4 717 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 C5orf46Q6UWT4 87 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 SPRED1Q7Z699 444 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 B3GNT8Q7Z7M8 397 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 ADGRG3Q86Y34 549 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 UBQLNLQ8IYU4 475 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 IZUMO1Q8IYV9 350 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 RNF113BQ8IZP6 322 aaKnown RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 TCTE3Q8IZS6 198 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 CENPLQ8N0S6 344 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 SLC43A2Q8N370 569 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 KLHL36Q8N4N3 616 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 FADS6Q8N9I5 356 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 OR52L2PQ8NGH6 319 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 OR52B4Q8NGK2 314 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 OR4L1Q8NH43 312 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 OR52J3Q8NH60 311 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 ADAMTS14Q8WXS8 1223 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 DVL3Q92997 716 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 NAT6Q93015 286 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 C7orf34Q96L11 122 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 SIGLEC10Q96LC7 697 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 CYTH2Q99418 400 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 C12orf57Q99622 126 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 SEC22CQ9BRL7 303 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 TIMM29Q9BSF4 260 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 NTMT1Q9BV86 223 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 CHID1Q9BWS9 393 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 EGLN1Q9GZT9 426 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 ENKD1Q9H0I2 346 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 WWP1Q9H0M0 922 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 UBQLN3Q9H347 655 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 FN3KQ9H479 309 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 CAB39LQ9H9S4 337 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 SAP30LQ9HAJ7 183 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 RDH14Q9HBH5 336 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 PLAC1Q9HBJ0 212 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 SLCO1B3Q9NPD5 702 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 ZC4H2Q9NQZ6 224 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 FBXO6Q9NRD1 293 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 IMP3Q9NV31 184 aaKnown RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 MED9Q9NWA0 146 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 VSX1Q9NZR4 365 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-202ENST00000409915 SLAMF8Q9P0V8 285 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 EPHA6Q9UF33 1036 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 POMPQ9Y244 141 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 HSPE1-MOB4S4R3N1 261 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 IGF2RP11717 2491 aa4.2□□□□□ -1.74
SF3B1-202ENST00000409915 ZZEF1O43149 2961 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 RP1P56715 2156 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 CELSR3Q9NYQ7 3312 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ARHGEF17Q96PE2 2063 aaPredicted RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ZCWPW2A0A1B0GU75 182 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 OR6C68A6NDL8 312 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 MGAT4DA6NG13 374 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ANKDD1BA6NHY2 528 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 D6RAR5 112 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 LRRTM2O43300 516 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 B4GAT1O43505 415 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 EIF1BO60739 113 aaKnown RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 CSO75390 466 aaKnown RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 UPK1BO75841 260 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 PIAS1O75925 651 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 TSPAN12O95859 305 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 MT-CO3P00414 261 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 OTCP00480 354 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 HIST1H2ABP04908 130 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 IFNA4P05014 189 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 GP1BAP07359 652 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 SERPINA6P08185 405 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 C1QTNF9P0C862 333 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ERVK-10P10266 1014 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 MLNP12872 115 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 PGAM1P18669 254 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 HIST1H2ADP20671 130 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 IDSP22304 550 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 GCAP28676 217 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 PDHA2P29803 388 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 EIF1P41567 113 aaKnown RBP4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ELK3P41970 407 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 NSG1P42857 185 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 SLC1A2P43004 574 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 ETV4P43268 484 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 MAGEB1P43366 347 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 HLCSP50747 726 aa4.19□□□□□ -1.74
SF3B1-202ENST00000409915 DUSP3P51452 185 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms