RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 LSAMPQ13449 338 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 OCLNQ16625 522 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 BTBD16Q32M84 506 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF791Q3KP31 576 aaPredicted RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 XAF1Q6GPH4 301 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 ACSM5Q6NUN0 579 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 H3F3CQ6NXT2 135 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 SLC27A4Q6P1M0 643 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 IGF2-ASQ6U949 168 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 SATL1Q86VE3 508 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 MEX3DQ86XN8 651 aaKnown RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 DND1Q8IYX4 353 aaKnown RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 CADM2Q8N3J6 435 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 BPIFB6Q8NFQ5 453 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 NLGN4YQ8NFZ3 816 aaPredicted RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 OR8J1Q8NGP2 316 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 LIPHQ8WWY8 451 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 TMCO6Q96DC7 493 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 RASL10BQ96S79 203 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 DEFB126Q9BYW3 111 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 CCNB1IP1Q9NPC3 277 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 ATP13A2Q9NQ11 1180 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 RASSF1Q9NS23 344 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 IMPAD1Q9NX62 359 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 PSORS1C1Q9UIG5 152 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 NSG1A0A0A6YYJ2 146 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 B4DXG7 233 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 ETV2O00321 342 aaPredicted RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 CDC40O60508 579 aaKnown RBP eCLIP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 PTP4A3O75365 173 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 OR2J2O76002 312 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 CELA2AP08217 269 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 PIPP12273 146 aaPredicted RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 POU1F1P28069 291 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 RPS18P62269 152 aaKnown RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 DNASE1L3Q13609 305 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 CBFBQ13951 182 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 GINS1Q14691 196 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 CASP12Q6UXS9 341 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 SLC46A3Q7Z3Q1 461 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 TMPRSS12Q86WS5 348 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 FAM26EQ8N5C1 309 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 OR4Q3Q8NH05 313 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 GPR119Q8TDV5 335 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 SPACA9Q96E40 222 aaPredicted RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 FRMD6Q96NE9 622 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 MOGAT1Q96PD6 335 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 TUBA1CQ9BQE3 449 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 DPH1Q9BZG8 443 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 ZBTB20Q9HC78 741 aaPredicted RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 MED17Q9NVC6 651 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 PPP1R14DQ9NXH3 145 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 SCN3BQ9NY72 215 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 SIGLEC7Q9Y286 467 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 PCDHGB6Q9Y5F9 930 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 WDFY3Q8IZQ1 3526 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 DOCK10Q96BY6 2186 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 ANKUB1A6NFN9 424 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 CDRT15L2A8MXV6 281 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 M0R129 80 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 BHLHE40O14503 412 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 FAM20BO75063 409 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 PGCP20142 388 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 IL32P24001 234 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 CD82P27701 267 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 GRK5P34947 590 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 SLC9A3P48764 834 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 PCYT1AP49585 367 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 RPS4XP62701 263 aaKnown RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 PGGHGQ32M88 737 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 GTF2IRD2BQ6EKJ0 949 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 PTCHD4Q6ZW05 846 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 KCTD8Q6ZWB6 473 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 PRSS48Q7RTY5 328 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 GTF2IRD2Q86UP8 949 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 P3H2Q8IVL5 708 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 CDK20Q8IZL9 346 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 IQCF1Q8N6M8 205 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 ADAMTS17Q8TE56 1095 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 THAP3Q8WTV1 239 aaPredicted RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 SECISBP2Q96T21 854 aaKnown RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 RHNO1Q9BSD3 238 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 OR52D1Q9H346 318 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 TPK1Q9H3S4 243 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 CPNE5Q9HCH3 593 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 SH2D2AQ9NP31 389 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 TBC1D23Q9NUY8 699 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 CNOT2Q9NZN8 540 aaKnown RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 SELENONQ9NZV5 590 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.02□□□□□ -1.61
EPHA4-202ENST00000409854 SPAARA0A1B0GVQ0 90 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 CLCA1A8K7I4 914 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 C17orf51A8MQB3 221 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 EFCAB9A8MZ26 197 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 KPNA4O00629 521 aaPredicted RBP5.02□□□□□ -1.61
EPHA4-202ENST00000409854 SURF4O15260 269 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 HCRTR2O43614 444 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 SCO2O43819 266 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 PRKYO43930 277 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 RAD1O60671 282 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms