RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 PRKAR1AP10644 381 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 NT5EP21589 574 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 GABRA3P34903 492 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 ACTR1BP42025 376 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 ACTR1AP61163 376 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 MRPS15P82914 257 aaKnown RBP9.05□□□□□ -0.96
MSH2-202ENST00000406134 KLHL12Q53G59 568 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 TMEM92Q6UXU6 159 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 TMEM184AQ6ZMB5 413 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 CEACAM19Q7Z692 300 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 SAMD12Q8N8I0 201 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 COX18Q8N8Q8 333 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 C19orf18Q8NEA5 215 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 OR52R1Q8NGF1 315 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 TRMT10AQ8TBZ6 339 aaKnown RBP9.05□□□□□ -0.96
MSH2-202ENST00000406134 GHSRQ92847 366 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 KCTD12Q96CX2 325 aaKnown RBP9.05□□□□□ -0.96
MSH2-202ENST00000406134 MRGPRX1Q96LB2 322 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 VSTM2LQ96N03 204 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 IFT27Q9BW83 186 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 HEXA-AS1Q9H8Q6 139 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 PRR23D1E9PI22 279 aaPredicted RBP9.05□□□□□ -0.96
MSH2-202ENST00000406134 SYPP08247 313 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 PRR23D2P0DMB1 279 aaPredicted RBP9.05□□□□□ -0.96
MSH2-202ENST00000406134 SNRPD2P62316 118 aaKnown RBP9.05□□□□□ -0.96
MSH2-202ENST00000406134 DGCR2P98153 550 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 CCDC58Q4VC31 144 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 ZCCHC12Q6PEW1 402 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 CADM2Q8N3J6 435 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 WDR92Q96MX6 357 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 GFM1Q96RP9 751 aaKnown RBP9.05□□□□□ -0.96
MSH2-202ENST00000406134 NMNAT2Q9BZQ4 307 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 S1PR5Q9H228 398 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 OR51V1Q9H2C8 321 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 WBP1LQ9NX94 342 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 SLC23A1Q9UHI7 598 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 ENTPD2Q9Y5L3 495 aa9.05□□□□□ -0.96
MSH2-202ENST00000406134 IGKV1D-42A0A075B6H8 117 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 FAM240BA0A1B0GVZ2 78 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 IDSB3KWA1 339 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 FZD7O75084 574 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 CPNE3O75131 537 aaKnown RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 MT-ND5P03915 603 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 CXCL3P19876 107 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 PITPNBP48739 271 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 BTG1P62324 171 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 RPS4XP62701 263 aaKnown RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 CDONQ4KMG0 1287 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 MZT2AQ6P582 158 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 UNQ9370/PRO34162Q6UXP9 181 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 RD3Q7Z3Z2 195 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 ZNF687Q8N1G0 1237 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 NPEPL1Q8NDH3 523 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 OR10G6Q8NH81 332 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 ORAI1Q96D31 301 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 KCNN2Q9H2S1 579 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 ADAM18Q9Y3Q7 739 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 PCDHGA9Q9Y5G4 932 aaKnown RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 OR2W5A6NFC9 320 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 J3QLW9 94 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 APBB3O95704 486 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 GUSBP08236 651 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 UCHL1P09936 223 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 EPXP11678 715 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 PEPDP12955 493 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 SNRPBP14678 240 aaKnown RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 ZNF19P17023 458 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 ERP29P30040 261 aaKnown RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 BMP8BP34820 402 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 NRG3P56975 720 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 DLX2Q07687 328 aaPredicted RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 HYAL1Q12794 435 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 CDK5R1Q15078 307 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 FCN2Q15485 313 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 GXYLT1Q4G148 440 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 TP53I3Q53FA7 332 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 ACSM3Q53FZ2 586 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 ASB18Q6ZVZ8 466 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 ABHD13Q7L211 337 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 BMP8AQ7Z5Y6 402 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 TPRA1Q86W33 373 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 EXD3Q8N9H8 876 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 SDR9C7Q8NEX9 313 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 SMIM19Q96E16 107 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 NDC1Q9BTX1 674 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 GON7Q9BXV9 100 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 CLEC1BQ9P126 229 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 ZNF346Q9UL40 294 aaKnown RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 MED31Q9Y3C7 131 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 TRAV1-2A0A0B4J238 106 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 EEF1E1O43324 174 aaKnown RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 KLF8O95600 359 aaPredicted RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 EN2P19622 333 aaPredicted RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 MST1P26927 711 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 MAGEB1P43366 347 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 NANOS3P60323 173 aaKnown RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 ZP1P60852 638 aa9.04□□□□□ -0.96
MSH2-202ENST00000406134 SRP54P61011 504 aaKnown RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 POU6F2P78424 691 aaPredicted RBP9.04□□□□□ -0.96
MSH2-202ENST00000406134 KLF9Q13886 244 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms