RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 BCL2A1Q16548 175 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 FXNQ16595 210 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 SLC25A53Q5H9E4 307 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 PDSS1Q5T2R2 415 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 VASNQ6EMK4 673 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 CHMP1BQ7LBR1 199 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 DHFR2Q86XF0 187 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 SPPL2CQ8IUH8 684 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 CADM2Q8N3J6 435 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 ACBD4Q8NC06 268 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 SLC25A43Q8WUT9 341 aaPredicted RBP9.52□□□□□ -0.89
RPAIN-204ENST00000405578 DNAJA4Q8WW22 397 aaPredicted RBP9.52□□□□□ -0.89
RPAIN-204ENST00000405578 GEMIN6Q8WXD5 167 aaKnown RBP9.52□□□□□ -0.89
RPAIN-204ENST00000405578 NRGNQ92686 78 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 CCDC124Q96CT7 223 aaKnown RBP9.52□□□□□ -0.89
RPAIN-204ENST00000405578 ASB9Q96DX5 294 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 LRMDAQ9H2I8 198 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 GMPR2Q9P2T1 348 aaKnown RBP9.52□□□□□ -0.89
RPAIN-204ENST00000405578 SLC6A5Q9Y345 797 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 HRH3Q9Y5N1 445 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 LIPGQ9Y5X9 500 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 NUP214P35658 2090 aaPredicted RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 H3BML4 177 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 ETV2O00321 342 aaPredicted RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 FRS3O43559 492 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 BCAS1O75363 584 aaPredicted RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 IFNW1P05000 195 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 PNMTP11086 282 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 GABRA1P14867 456 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 HOXB6P17509 224 aaKnown RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 BMP7P18075 431 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 CXCR1P25024 350 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 SLC7A1P30825 629 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 DNAJA1P31689 397 aaKnown RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 MSX2P35548 267 aaPredicted RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 ACAA2P42765 397 aaKnown RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 IST1P53990 364 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 RPS3AP61247 264 aaKnown RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 RAC1P63000 192 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 HSF1Q00613 529 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 TRAP1Q12931 704 aaKnown RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 FOXF1Q12946 379 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 SELENBP1Q13228 472 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 TOMM34Q15785 309 aaPredicted RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 NRF1Q16656 503 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 TMEM44Q2T9K0 475 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 IFI44LQ53G44 452 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 C3orf33Q6P1S2 294 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 PLEKHM3Q6ZWE6 761 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 CBLL1Q75N03 491 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 TMEM200AQ86VY9 491 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 CYP4Z1Q86W10 505 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 CARM1Q86X55 608 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 ULK2Q8IYT8 1036 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 LSMEM1Q8N8F7 131 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 GPR32P1Q8NGA4 272 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 OR5M1Q8NGP8 315 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 VANGL1Q8TAA9 524 aaPredicted RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 FAM57AQ8TBR7 257 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 RNF217Q8TC41 542 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 SMPDL3BQ92485 455 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 MCHR1Q99705 422 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 TIMP4Q99727 224 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 ARHGDIGQ99819 225 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 UGT2B28Q9BY64 529 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 POLR2J2Q9GZM3 115 aaKnown RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 PCDHAC1Q9H158 963 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 POLR2J3Q9H1A7 115 aaKnown RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 TIGARQ9NQ88 270 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 DCAF13Q9NV06 445 aaKnown RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 PAQR5Q9NXK6 330 aaPredicted RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 ALKBH4Q9NXW9 302 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 CAMK2AQ9UQM7 478 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 FAM32AQ9Y421 112 aaKnown RBP9.51□□□□□ -0.89
RPAIN-204ENST00000405578 CHST2Q9Y4C5 530 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 JMJD1CQ15652 2540 aa9.51□□□□□ -0.89
RPAIN-204ENST00000405578 CSPG4Q6UVK1 2322 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 B4DXG7 233 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 H0Y3Z8 333 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 M0R3H8 397 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 WDR1O75083 606 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 CIB2O75838 187 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 WISP2O76076 250 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 PRG2P13727 222 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 CPN1P15169 458 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 ITGA2P17301 1181 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 TACR3P29371 465 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 CLK1P49759 484 aaKnown RBP9.5□□□□□ -0.89
RPAIN-204ENST00000405578 DLX5P56178 289 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 B3GALT5-AS1P59052 145 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 TAS2R41P59536 307 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 PLAURQ03405 335 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 CRYZQ08257 329 aaKnown RBP9.5□□□□□ -0.89
RPAIN-204ENST00000405578 FOXD4Q12950 439 aaPredicted RBP9.5□□□□□ -0.89
RPAIN-204ENST00000405578 FLOT2Q14254 428 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 GXYLT1Q4G148 440 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 SWT1Q5T5J6 900 aaKnown RBP9.5□□□□□ -0.89
RPAIN-204ENST00000405578 LCN8Q6JVE9 175 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 ZNF585AQ6P3V2 769 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 ZNF613Q6PF04 617 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms