RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 ZBTB8AQ96BR9 441 aa12.84□□□□□ -0.35
RUNX3-203ENST00000399916 PDLIM5Q96HC4 596 aaKnown RBP12.84□□□□□ -0.35
RUNX3-203ENST00000399916 C4orf36Q96KX1 117 aa12.84□□□□□ -0.35
RUNX3-203ENST00000399916 C2orf78A6NCI8 922 aa12.84□□□□□ -0.35
RUNX3-203ENST00000399916 PNPP00491 289 aa12.84□□□□□ -0.35
RUNX3-203ENST00000399916 ACAA1P09110 424 aaPredicted RBP12.84□□□□□ -0.35
RUNX3-203ENST00000399916 DCTDP32321 178 aa12.84□□□□□ -0.35
RUNX3-203ENST00000399916 RPL29P47914 159 aaKnown RBP12.84□□□□□ -0.35
RUNX3-203ENST00000399916 SERINC3Q13530 473 aa12.84□□□□□ -0.35
RUNX3-203ENST00000399916 FNDC3BQ53EP0 1204 aaKnown RBP12.84□□□□□ -0.35
RUNX3-203ENST00000399916 POMZP3Q6PJE2 187 aa12.84□□□□□ -0.35
RUNX3-203ENST00000399916 KCNRGQ8N5I3 272 aa12.84□□□□□ -0.35
RUNX3-203ENST00000399916 SEMA6DQ8NFY4 1073 aa12.84□□□□□ -0.35
RUNX3-203ENST00000399916 OR13C5Q8NGS8 318 aa12.84□□□□□ -0.35
RUNX3-203ENST00000399916 SAMD8Q96LT4 415 aa12.84□□□□□ -0.35
RUNX3-203ENST00000399916 SAMD11Q96NU1 681 aa12.84□□□□□ -0.35
RUNX3-203ENST00000399916 C2orf42Q9NWW7 574 aa12.84□□□□□ -0.35
RUNX3-203ENST00000399916 KCNMB2Q9Y691 235 aa12.84□□□□□ -0.35
RUNX3-203ENST00000399916 TRDV1A0A1B0GX56 115 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 TMEM218A2RU14 115 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 FAM171A2A8MVW0 826 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 CASC3O15234 703 aaKnown RBP12.83□□□□□ -0.36
RUNX3-203ENST00000399916 GABRA1P14867 456 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 CXCL2P19875 107 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 GNALP38405 381 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 SSR2P43308 183 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 ZNF155Q12901 538 aaPredicted RBP12.83□□□□□ -0.36
RUNX3-203ENST00000399916 PODNL1Q6PEZ8 512 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 OR2W3Q7Z3T1 314 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 FAM26EQ8N5C1 309 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 ZNF707Q96C28 371 aaPredicted RBP12.83□□□□□ -0.36
RUNX3-203ENST00000399916 SUV39H2Q9H5I1 410 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 GRXCR2A6NFK2 248 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 IL3P08700 152 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 C8orf89P0DMQ9 161 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 ACP2P11117 423 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 RNH1P13489 461 aaKnown RBP12.83□□□□□ -0.36
RUNX3-203ENST00000399916 ACVR2AP27037 513 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 CCR9P51686 369 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 IL13RA1P78552 427 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 CAP1Q01518 475 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 IHHQ14623 411 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 TGIF1Q15583 401 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 XKR7Q5GH72 579 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 CD200R1Q8TD46 325 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 POPDC3Q9HBV1 291 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 SLC45A1Q9Y2W3 748 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 MGAMO43451 1857 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 TUBAL3A6NHL2 446 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 RECKO95980 971 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 IFNGR1P15260 489 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 TLX1P31314 330 aaPredicted RBP12.83□□□□□ -0.36
RUNX3-203ENST00000399916 RGRP47804 291 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 ST8SIA6P61647 398 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 SMAD2Q15796 467 aaKnown RBP12.83□□□□□ -0.36
RUNX3-203ENST00000399916 OR2A2Q6IF42 318 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 ACSM5Q6NUN0 579 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 C1orf94Q6P1W5 598 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 CERS6Q6ZMG9 384 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 OR2T33Q8NG76 320 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 ESRP2Q9H6T0 727 aaKnown RBP12.83□□□□□ -0.36
RUNX3-203ENST00000399916 KLHL42Q9P2K6 505 aa12.83□□□□□ -0.36
RUNX3-203ENST00000399916 DHCR7Q9UBM7 475 aaKnown RBP12.83□□□□□ -0.36
RUNX3-203ENST00000399916 FCF1Q9Y324 198 aaKnown RBP12.83□□□□□ -0.36
RUNX3-203ENST00000399916 RTCAO00442 366 aaKnown RBP12.82□□□□□ -0.36
RUNX3-203ENST00000399916 EIF1BO60739 113 aaKnown RBP12.82□□□□□ -0.36
RUNX3-203ENST00000399916 MAOAP21397 527 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 TACR2P21452 398 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 EIF1P41567 113 aaKnown RBP12.82□□□□□ -0.36
RUNX3-203ENST00000399916 NDUFA9Q16795 377 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 ZNF792Q3KQV3 632 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 SLC25A35Q3KQZ1 300 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 SYT14P1Q58G82 188 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 DOK4Q8TEW6 326 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 FOXRED1Q96CU9 486 aaPredicted RBP12.82□□□□□ -0.36
RUNX3-203ENST00000399916 NECAB3Q96P71 396 aaPredicted RBP12.82□□□□□ -0.36
RUNX3-203ENST00000399916 TSPAN10Q9H1Z9 355 aaPredicted RBP12.82□□□□□ -0.36
RUNX3-203ENST00000399916 NLE1Q9NVX2 485 aaPredicted RBP12.82□□□□□ -0.36
RUNX3-203ENST00000399916 BTNL2Q9UIR0 455 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 POLR2AP24928 1970 aaKnown RBP12.82□□□□□ -0.36
RUNX3-203ENST00000399916 ZC3H12DA2A288 527 aaKnown RBP12.82□□□□□ -0.36
RUNX3-203ENST00000399916 RNF13O43567 381 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 F2P00734 622 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 OR8U9P0C7N5 309 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 NDUFB7P17568 137 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 ITGB8P26012 769 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 MRPS6P82932 125 aaKnown RBP12.82□□□□□ -0.36
RUNX3-203ENST00000399916 RIPPLY1Q0D2K3 151 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 GAB1Q13480 694 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 SLBPQ14493 270 aaKnown RBP eCLIP12.82□□□□□ -0.36
RUNX3-203ENST00000399916 GLB1LQ6UWU2 654 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 AGMOQ6ZNB7 445 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 LDLRAD3Q86YD5 345 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 MDGA1Q8NFP4 955 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 OR51S1Q8NGJ8 323 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 TMEM106CQ9BVX2 250 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 LANCL2Q9NS86 450 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 FBXO7Q9Y3I1 522 aa12.82□□□□□ -0.36
RUNX3-203ENST00000399916 ZFP37Q9Y6Q3 630 aaPredicted RBP12.82□□□□□ -0.36
RUNX3-203ENST00000399916 A0A1W2PPH5 198 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms