RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 BMP2P12643 396 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 LOXP28300 417 aaPredicted RBP13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 SLC1A3P43003 542 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 OR3A2P47893 321 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 ATP4BP51164 291 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 AQP5P55064 265 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 RASGEF1BQ0VAM2 473 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 EPS8Q12929 822 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 PDK3Q15120 406 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 RGNQ15493 299 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 LIN52Q52LA3 116 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 LRIF1Q5T3J3 769 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 RNF220Q5VTB9 566 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 PRAMEF8Q5VWM4 474 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 PRAMEF7Q5VXH5 474 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 ANKRD34AQ69YU3 496 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 ABLIM2Q6H8Q1 611 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 BLOC1S3Q6QNY0 202 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 C22orf34Q6ZV56 151 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 MTDHQ86UE4 582 aaKnown RBP13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 ADGRG3Q86Y34 549 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 FUNDC1Q8IVP5 155 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 STEAP2Q8NFT2 490 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 SLC38A5Q8WUX1 472 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 CKAP2Q8WWK9 683 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 ZHX1-C8orf76Q96EF9 292 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 PIK3IP1Q96FE7 263 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 MAGEB18Q96M61 343 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 HDHD5Q9BXW7 423 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 PCDHB14Q9Y5E9 798 aa13.22□□□□□ -0.29
SMIM11A-203ENST00000399299 NF1P21359 2839 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 IGKV3D-15A0A087WSY6 115 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 A0A0G2JPF8 293 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 CDHR4A6H8M9 788 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 HNRNPCL2B2RXH8 293 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 HNRNPCL3B7ZW38 293 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 CLIC1O00299 241 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 ZNF208O43345 1280 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 HNRNPCL1O60812 293 aaKnown RBP13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 HNRNPCL4P0DMR1 293 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 TFPIP10646 304 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 CD53P19397 219 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 POLR2HP52434 150 aaKnown RBP13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 P2RY6Q15077 328 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 DEFB113Q30KQ7 82 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 BEX5Q5H9J7 111 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 SLC2A7Q6PXP3 512 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 ZNF836Q6ZNA1 936 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 OR52P1PQ8NH57 321 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 SPDL1Q96EA4 605 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 ZC3HAV1LQ96H79 300 aaKnown RBP13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 TMEM19Q96HH6 336 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 ARL5BQ96KC2 179 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 USB1Q9BQ65 265 aaKnown RBP13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 ACTR6Q9GZN1 396 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 A4GALTQ9NPC4 353 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 SLC52A3Q9NQ40 469 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 EMC3Q9P0I2 261 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 OSGIN1Q9UJX0 560 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 TRAPPC4Q9Y296 219 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 GMEB1Q9Y692 573 aa13.21□□□□□ -0.29
SMIM11A-203ENST00000399299 ROS1P08922 2347 aa13.21□□□□□ -0.3
SMIM11A-203ENST00000399299 TMED7-TICAM2A0A0A6YYA0 188 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 KLF4O43474 513 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 CNOT4O95628 575 aaKnown RBP13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 KLK2P20151 261 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 PPIBP23284 216 aaKnown RBP13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 SQLEQ14534 574 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 LARS2Q15031 903 aaKnown RBP13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 SFRP5Q5T4F7 317 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 Q6ZT83 130 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 GALNT5Q7Z7M9 940 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 CXorf67Q86X51 503 aaPredicted RBP13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 VRK2Q86Y07 508 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 TGIF2LYQ8IUE0 185 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 PIGXQ8TBF5 258 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 DDIT4LQ96D03 193 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 OR11A1Q9GZK7 315 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 ADAM19Q9H013 955 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 ARMC7Q9H6L4 198 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 CACYBPQ9HB71 228 aaKnown RBP13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 BCL2L10Q9HD36 194 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 BEX4Q9NWD9 120 aaPredicted RBP13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 SLC25A37Q9NYZ2 338 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 CCDC167Q9P0B6 97 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 TMEM181Q9P2C4 612 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 ZNF443Q9Y2A4 671 aaPredicted RBP13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 IFT52Q9Y366 437 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 TMED7Q9Y3B3 224 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 ACANP16112 2415 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 PRR14LQ5THK1 2151 aa13.2□□□□□ -0.3
SMIM11A-203ENST00000399299 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 ZNF716A6NP11 495 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 NR5A2O00482 541 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 EIF1BO60739 113 aaKnown RBP13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 FPR1P21462 350 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 TACR3P29371 465 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 ACAA2P42765 397 aaKnown RBP13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 SLC16A1P53985 500 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 NR1H2P55055 460 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms