RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 TIGD4Q8IY51 512 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 SPTSSAQ969W0 71 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 TEX101Q9BY14 249 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 DCDC2BA2VCK2 349 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 GABRPO00591 440 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 PLRG1O43660 514 aaKnown RBP13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 SMIM18P0DKX4 95 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 RPS5P46782 204 aaKnown RBP13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 DUSP5Q16690 384 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 AGBL4Q5VU57 503 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 MISPQ8IVT2 679 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 EID2Q8N6I1 236 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 DHRS1Q96LJ7 313 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 PAQR5Q9NXK6 330 aaPredicted RBP13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 ABRACLQ9P1F3 81 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 QSER1Q2KHR3 1735 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 NSG1A0A0A6YYJ2 146 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 NAP1L6A6NFF2 107 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 HMGN4O00479 90 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 CCR5P51681 352 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 SNRPGP62308 76 aaKnown RBP13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 CSNK2A1P68400 391 aaPredicted RBP13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 OR5M10Q6IEU7 315 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 MED25Q71SY5 747 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 OR7G1Q8NGA0 311 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 RSC1A1Q92681 617 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 CCDC120Q96HB5 630 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 SENP5Q96HI0 755 aaPredicted RBP13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 VN1R3Q9BXE9 311 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 PRDM9Q9NQV7 894 aa13.21□□□□□ -0.29
PCDHGA11-201ENST00000398587 PTPRZ1P23471 2315 aaPredicted RBP13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 A6NCN8 305 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 LCMT2O60294 686 aaKnown RBP13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 CEACAM5P06731 702 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR2T7P0C7T2 308 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 DRD5P21918 477 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 BSGP35613 385 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 CRMP1Q14194 572 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 C9orf50Q5SZB4 431 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 DESI1Q6ICB0 168 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 KIAA1211LQ6NV74 962 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 UNQ6126/PRO20091Q6UXV3 157 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 LRRC28Q86X40 367 aaPredicted RBP13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 TDHQ8IZJ6 230 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 POGLUT1Q8NBL1 392 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR2A1Q8NGT9 310 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR2T27Q8NH04 317 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 SLC25A18Q9H1K4 315 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 SYT4Q9H2B2 425 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 RDH8Q9NYR8 311 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 MOKQ9UQ07 419 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 PCDHGA6Q9Y5G7 932 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 ARFGEF1Q9Y6D6 1849 aa13.21□□□□□ -0.3
PCDHGA11-201ENST00000398587 H3BUI4 141 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 I3L521 148 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 PLATP00750 562 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 PET100P0DJ07 73 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 PPP2CBP62714 309 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 PPP2CAP67775 309 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 AWAT2Q6E213 333 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 MMP21Q8N119 569 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 SLC43A2Q8N370 569 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 PARP16Q8N5Y8 322 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 TMEM255BQ8WV15 326 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 ASB17Q8WXJ9 295 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 KCTD12Q96CX2 325 aaKnown RBP13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 SLC39A1Q9NY26 324 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 FBXL3Q9UKT7 428 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 ZSCAN5BA6NJL1 495 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 FTCDNL1E5RQL4 147 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 CHP2O43745 196 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 RAD1O60671 282 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 DNAJB6O75190 326 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 AMY2AP04746 511 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 NID1P14543 1247 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 HTR1FP30939 366 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 CSNK1A1P48729 337 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 SLC35A2P78381 396 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 DCDP81605 110 aaKnown RBP13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 POU3F1Q03052 451 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 RELAQ04206 551 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 TBC1D15Q8TC07 691 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 DUSP19Q8WTR2 217 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR10A4Q9H209 315 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 UBQLN3Q9H347 655 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 MED20Q9H944 212 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 SYNPO2LQ9H987 977 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 PCDH10Q9P2E7 1040 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 NDRG4Q9ULP0 352 aaKnown RBP13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 TOXO94900 526 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 TRMT12Q53H54 448 aaKnown RBP13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 RBM45Q8IUH3 476 aaKnown RBP13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 SUN5Q8TC36 379 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 UBE2FQ969M7 185 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 FAM71F1Q96KD3 344 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 HYLS1Q96M11 299 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR5M11Q96RB7 305 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 THAP7Q9BT49 309 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 GABARAPL1Q9H0R8 117 aa13.2□□□□□ -0.3
PCDHGA11-201ENST00000398587 ZNF160Q9HCG1 818 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms