RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 RSBN1Q5VWQ0 802 aaPredicted RBP1.96□□□□□ -2.1
CD47-203ENST00000398258 C11orf71Q6IPW1 123 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 MOB1BQ7L9L4 216 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 EFL1Q7Z2Z2 1120 aaKnown RBP1.96□□□□□ -2.1
CD47-203ENST00000398258 LCA5Q86VQ0 697 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 TRIM69Q86WT6 500 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 CCDC50Q8IVM0 306 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 CD177Q8N6Q3 437 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 MFSD9Q8NBP5 474 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 BHLHE23Q8NDY6 225 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 OR56B4Q8NH76 319 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 HTR3CQ8WXA8 447 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 NPAS2Q99743 824 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 RAB34Q9BZG1 259 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 YY1AP1Q9H869 796 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 POPDC2Q9HBU9 364 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 MCCC2Q9HCC0 563 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 FANCFQ9NPI8 374 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 NANSQ9NR45 359 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 ABCD2Q9UBJ2 740 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 LCMT1Q9UIC8 334 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 CDH9Q9ULB4 789 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 PLLPQ9Y342 182 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 IKBKGQ9Y6K9 419 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 KANK1Q14678 1352 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 PCP4L1A6NKN8 68 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 SNTNA6NMZ2 147 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 IDSB3KWA1 339 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 TRDCB7Z8K6 153 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 K7N7A8 449 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 ZNF208O43345 1280 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 PFKFB2O60825 505 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 RAMP3O60896 148 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 TBL1XO60907 577 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 HSMCR30P0CW71 290 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 POLR2EP19388 210 aaKnown RBP1.95□□□□□ -2.1
CD47-203ENST00000398258 VDAC1P21796 283 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 PCMT1P22061 227 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 AQP1P29972 269 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 FGF9P31371 208 aaPredicted RBP1.95□□□□□ -2.1
CD47-203ENST00000398258 DDOSTP39656 456 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 RPL13AP40429 203 aaKnown RBP1.95□□□□□ -2.1
CD47-203ENST00000398258 OPRD1P41143 372 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 SLC26A2P50443 739 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 SLC10A7Q0GE19 358 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 LRRC74AQ0VAA2 488 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 CUL1Q13616 776 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 VGLL4Q14135 290 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 GRB7Q14451 532 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 ARL6IP1Q15041 203 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 EOGTQ5NDL2 527 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 GPRC6AQ5T6X5 926 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 TPGS2Q68CL5 300 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 ZSCAN25Q6NSZ9 544 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 KCNIP4Q6PIL6 250 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 UNQ9370/PRO34162Q6UXP9 181 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 GDPD3Q7L5L3 318 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 FBXO16Q8IX29 292 aaPredicted RBP1.95□□□□□ -2.1
CD47-203ENST00000398258 C11orf42Q8N5U0 333 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 FAM83FQ8NEG4 500 aaPredicted RBP1.95□□□□□ -2.1
CD47-203ENST00000398258 OR8J1Q8NGP2 316 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 OR13C2Q8NGS9 318 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 ZNF564Q8TBZ8 553 aaPredicted RBP1.95□□□□□ -2.1
CD47-203ENST00000398258 SCFD1Q8WVM8 642 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 UBE2E3Q969T4 207 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 SLC38A2Q96QD8 506 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 SMIM14Q96QK8 99 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 KCNA7Q96RP8 456 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 TBX15Q96SF7 602 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 KLHDC3Q9BQ90 382 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 SLC39A3Q9BRY0 314 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 NIPAL2Q9H841 368 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 ZDHHC11Q9H8X9 412 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 ADAM28Q9UKQ2 775 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 CLEC4EQ9ULY5 219 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 CLEC4AQ9UMR7 237 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 VSIG4Q9Y279 399 aa1.95□□□□□ -2.1
CD47-203ENST00000398258 RPAP1Q9BWH6 1393 aaPredicted RBP1.95□□□□□ -2.1
CD47-203ENST00000398258 PRRC2AP48634 2157 aaKnown RBP1.95□□□□□ -2.1
CD47-203ENST00000398258 SH3TC1Q8TE82 1336 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 ZNF646O15015 1829 aaPredicted RBP1.94□□□□□ -2.1
CD47-203ENST00000398258 A0A0G2JRQ6 117 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 TUBAL3A6NHL2 446 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 VSTM2BA6NLU5 285 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 ZFP92A6NM28 416 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 E7ENQ6 273 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 DCTN6O00399 190 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 ZNF264O43296 627 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 B4GALT2O60909 372 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 CLDN9O95484 217 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 AP2A1O95782 977 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 TSPAN12O95859 305 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 DNAH10OSP0CZ25 163 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 NPR2P20594 1047 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 PSMB1P20618 241 aaKnown RBP1.94□□□□□ -2.1
CD47-203ENST00000398258 EPHX2P34913 555 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 QARSP47897 775 aaKnown RBP1.94□□□□□ -2.1
CD47-203ENST00000398258 FGL1Q08830 312 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 CCDC173Q0VFZ6 552 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 ASPHQ12797 758 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms