RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 RCE1Q9Y256 329 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 PSMD9O00233 223 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 CEACAM5P06731 702 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 UGT2B7P16662 529 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 PSMB10P40306 273 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 WASP42768 502 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 RAD52P43351 418 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 SFRP5Q5T4F7 317 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 ZC3H14Q6PJT7 736 aaKnown RBP12.84□□□□□ -0.35
NUP98-204ENST00000397004 TMPRSS11FQ6ZWK6 438 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 GPALPP1Q8IXQ4 340 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 TEX19Q8NA77 164 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 SMIM4Q8WVI0 70 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 NR4A3Q92570 626 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 PTCHD1Q96NR3 888 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 KLHL28Q9NXS3 571 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 PCDHGA5Q9Y5G8 931 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 ABHD14A-ACY1A0A1B0GW23 586 aa12.83□□□□□ -0.35
NUP98-204ENST00000397004 ANKRD61A6NGH8 418 aa12.83□□□□□ -0.35
NUP98-204ENST00000397004 RPN2P04844 631 aa12.83□□□□□ -0.35
NUP98-204ENST00000397004 PPM1AP35813 382 aa12.83□□□□□ -0.35
NUP98-204ENST00000397004 RPE65Q16518 533 aa12.83□□□□□ -0.35
NUP98-204ENST00000397004 OR52I2Q8NH67 350 aa12.83□□□□□ -0.35
NUP98-204ENST00000397004 GRHL3Q8TE85 626 aa12.83□□□□□ -0.35
NUP98-204ENST00000397004 TRIM43Q96BQ3 446 aaPredicted RBP12.83□□□□□ -0.35
NUP98-204ENST00000397004 OTUB2Q96DC9 234 aa12.83□□□□□ -0.35
NUP98-204ENST00000397004 NXPE2Q96DL1 559 aa12.83□□□□□ -0.35
NUP98-204ENST00000397004 MS4A4EQ96PG1 132 aa12.83□□□□□ -0.35
NUP98-204ENST00000397004 OR10A4Q9H209 315 aa12.83□□□□□ -0.35
NUP98-204ENST00000397004 HRASLSQ9HDD0 168 aa12.83□□□□□ -0.35
NUP98-204ENST00000397004 NPFFR2Q9Y5X5 522 aa12.83□□□□□ -0.35
NUP98-204ENST00000397004 GXYLT2A0PJZ3 443 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 OGG1O15527 345 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 HOXD4P09016 255 aaPredicted RBP12.83□□□□□ -0.36
NUP98-204ENST00000397004 CLTBP09497 229 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 CT62P0C5K7 136 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 CCR9P51686 369 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 MAP2K6P52564 334 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 C2orf68Q2NKX9 166 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 GXYLT1Q4G148 440 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 FBXO42Q6P3S6 717 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 FAM198BQ6UWH4 519 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 FTMTQ8N4E7 242 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 FAM98AQ8NCA5 519 aaKnown RBP12.83□□□□□ -0.36
NUP98-204ENST00000397004 CHIAQ9BZP6 476 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 DIABLOQ9NR28 239 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 NUP50Q9UKX7 468 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 ICAM5Q9UMF0 924 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 ALPK2Q86TB3 2170 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 ZNF860A6NHJ4 632 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 TEX46H3BTG2 121 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 SLC9A3R1O14745 358 aaPredicted RBP12.83□□□□□ -0.36
NUP98-204ENST00000397004 LDB3O75112 727 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 NAA10P41227 235 aaPredicted RBP12.83□□□□□ -0.36
NUP98-204ENST00000397004 NANOS3P60323 173 aaKnown RBP12.83□□□□□ -0.36
NUP98-204ENST00000397004 ZSWIM7Q19AV6 140 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 NHLRC1Q6VVB1 395 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 GPAT4Q86UL3 456 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 NRROSQ86YC3 692 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 HDDC3Q8N4P3 179 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 LINC00052Q96N35 136 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 GPR174Q9BXC1 333 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 SLC25A18Q9H1K4 315 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 SLC35A3Q9Y2D2 325 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 ZNF780BQ9Y6R6 833 aa12.83□□□□□ -0.36
NUP98-204ENST00000397004 TRAV1-2A0A0B4J238 106 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 CTSVO60911 334 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 UCHL1P09936 223 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 HIST1H1CP16403 213 aaKnown RBP12.82□□□□□ -0.36
NUP98-204ENST00000397004 ANXA11P50995 505 aaKnown RBP12.82□□□□□ -0.36
NUP98-204ENST00000397004 CDK5R1Q15078 307 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 DGAT2L6Q6ZPD8 337 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 LRRC25Q8N386 305 aaPredicted RBP12.82□□□□□ -0.36
NUP98-204ENST00000397004 MFSD9Q8NBP5 474 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 SDR9C7Q8NEX9 313 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 ADAM18Q9Y3Q7 739 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 TEX51A0A1B0GUA7 166 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 SLC22A31A6NKX4 558 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 GSTZ1O43708 216 aaPredicted RBP12.82□□□□□ -0.36
NUP98-204ENST00000397004 GATBO75879 557 aaKnown RBP12.82□□□□□ -0.36
NUP98-204ENST00000397004 TMIGD3P0DMS9 266 aaPredicted RBP12.82□□□□□ -0.36
NUP98-204ENST00000397004 SAGP10523 405 aaPredicted RBP12.82□□□□□ -0.36
NUP98-204ENST00000397004 GDI2P50395 445 aaKnown RBP12.82□□□□□ -0.36
NUP98-204ENST00000397004 BLVRAP53004 296 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 HES5Q5TA89 166 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 TTLQ8NG68 377 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 RPLP0P6Q8NHW5 317 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 FLVCR1-AS1Q8TAF5 88 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 CNOT9Q92600 299 aaKnown RBP12.82□□□□□ -0.36
NUP98-204ENST00000397004 SMIM19Q96E16 107 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 CXorf58Q96LI9 332 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 HDAC8Q9BY41 377 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 MS4A7Q9GZW8 240 aaPredicted RBP12.82□□□□□ -0.36
NUP98-204ENST00000397004 CALML5Q9NZT1 146 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 RPS6KB2Q9UBS0 482 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 SCP2D1Q9UJQ7 156 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 SPATA2Q9UM82 520 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 CAMK2AQ9UQM7 478 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 PRUNE2Q8WUY3 3088 aa12.82□□□□□ -0.36
NUP98-204ENST00000397004 SSNA1O43805 119 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms