RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 BBS10Q8TAM1 723 aa27.38■■□□□ 1.97
CMTM4-202ENST00000394106 ARL5BQ96KC2 179 aa27.38■■□□□ 1.97
CMTM4-202ENST00000394106 TMEM120AQ9BXJ8 343 aa27.38■■□□□ 1.97
CMTM4-202ENST00000394106 KLHL9Q9P2J3 617 aa27.38■■□□□ 1.97
CMTM4-202ENST00000394106 LEF1Q9UJU2 399 aaPredicted RBP27.38■■□□□ 1.97
CMTM4-202ENST00000394106 OSGIN1Q9UJX0 560 aa27.38■■□□□ 1.97
CMTM4-202ENST00000394106 TRBV5-3A0A0A0MS03 114 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 FAAHO00519 579 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 SLC1A3P43003 542 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 RASGEF1BQ0VAM2 473 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 HSP90B2PQ58FF3 399 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 ZNF311Q5JNZ3 666 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 RNF220Q5VTB9 566 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 OTOGQ6ZRI0 2925 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 BEND4Q6ZU67 534 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 C10orf111Q8N326 155 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 NFKBIDQ8NI38 313 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 ZC3HAV1LQ96H79 300 aaKnown RBP27.37■■□□□ 1.97
CMTM4-202ENST00000394106 PSD2Q9BQI7 771 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 GP6Q9HCN6 339 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 BCL2L10Q9HD36 194 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 FANCFQ9NPI8 374 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 ZNF226Q9NYT6 803 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 IFT52Q9Y366 437 aa27.37■■□□□ 1.97
CMTM4-202ENST00000394106 CYTIPO60759 359 aa27.36■■□□□ 1.97
CMTM4-202ENST00000394106 GOSR1O95249 250 aa27.36■■□□□ 1.97
CMTM4-202ENST00000394106 HRGP04196 525 aa27.36■■□□□ 1.97
CMTM4-202ENST00000394106 SF3A3Q12874 501 aaKnown RBP eCLIP27.36■■□□□ 1.97
CMTM4-202ENST00000394106 PRAMEF8Q5VWM4 474 aa27.36■■□□□ 1.97
CMTM4-202ENST00000394106 PRAMEF7Q5VXH5 474 aa27.36■■□□□ 1.97
CMTM4-202ENST00000394106 CADM2Q8N3J6 435 aa27.36■■□□□ 1.97
CMTM4-202ENST00000394106 TACO1Q9BSH4 297 aaKnown RBP27.36■■□□□ 1.97
CMTM4-202ENST00000394106 SPATA9Q9BWV2 254 aa27.36■■□□□ 1.97
CMTM4-202ENST00000394106 IKZF5Q9H5V7 419 aa27.36■■□□□ 1.97
CMTM4-202ENST00000394106 ARMC7Q9H6L4 198 aa27.36■■□□□ 1.97
CMTM4-202ENST00000394106 FGFR1OP2Q9NVK5 253 aa27.36■■□□□ 1.97
CMTM4-202ENST00000394106 C6orf203Q9P0P8 240 aaPredicted RBP27.36■■□□□ 1.97
CMTM4-202ENST00000394106 NDUFAF1Q9Y375 327 aa27.36■■□□□ 1.97
CMTM4-202ENST00000394106 HDGFL3Q9Y3E1 203 aa27.36■■□□□ 1.97
CMTM4-202ENST00000394106 TMEM72A0PK05 275 aa27.35■■□□□ 1.97
CMTM4-202ENST00000394106 EVPLLA8MZ36 301 aa27.35■■□□□ 1.97
CMTM4-202ENST00000394106 ANGPT2O15123 496 aa27.35■■□□□ 1.97
CMTM4-202ENST00000394106 PGM3O95394 542 aa27.35■■□□□ 1.97
CMTM4-202ENST00000394106 TROVE2P10155 538 aaKnown RBP eCLIP27.35■■□□□ 1.97
CMTM4-202ENST00000394106 FKBP2P26885 142 aaKnown RBP27.35■■□□□ 1.97
CMTM4-202ENST00000394106 ZSWIM7Q19AV6 140 aa27.35■■□□□ 1.97
CMTM4-202ENST00000394106 STAC2Q6ZMT1 411 aa27.35■■□□□ 1.97
CMTM4-202ENST00000394106 ZNF775Q96BV0 537 aaPredicted RBP27.35■■□□□ 1.97
CMTM4-202ENST00000394106 ZHX1-C8orf76Q96EF9 292 aa27.35■■□□□ 1.97
CMTM4-202ENST00000394106 ING1Q9UK53 422 aaPredicted RBP27.35■■□□□ 1.97
CMTM4-202ENST00000394106 CORO2BQ9UQ03 480 aa27.35■■□□□ 1.97
CMTM4-202ENST00000394106 SPG11Q96JI7 2443 aa27.35■■□□□ 1.97
CMTM4-202ENST00000394106 PMS2P2O95744 297 aa27.34■■□□□ 1.97
CMTM4-202ENST00000394106 ARAFP10398 606 aa27.34■■□□□ 1.97
CMTM4-202ENST00000394106 PRG2P13727 222 aa27.34■■□□□ 1.97
CMTM4-202ENST00000394106 ACAA2P42765 397 aaKnown RBP27.34■■□□□ 1.97
CMTM4-202ENST00000394106 CLK1P49759 484 aaKnown RBP27.34■■□□□ 1.97
CMTM4-202ENST00000394106 OR2B6P58173 313 aa27.34■■□□□ 1.97
CMTM4-202ENST00000394106 COPZ1P61923 177 aa27.34■■□□□ 1.97
CMTM4-202ENST00000394106 METTL21CQ5VZV1 264 aa27.34■■□□□ 1.97
CMTM4-202ENST00000394106 DLEU7Q6UYE1 221 aa27.34■■□□□ 1.97
CMTM4-202ENST00000394106 TFAP2EQ6VUC0 442 aa27.34■■□□□ 1.97
CMTM4-202ENST00000394106 DHDDSQ86SQ9 333 aa27.34■■□□□ 1.97
CMTM4-202ENST00000394106 MTDHQ86UE4 582 aaKnown RBP27.34■■□□□ 1.97
CMTM4-202ENST00000394106 DDIT4LQ96D03 193 aa27.34■■□□□ 1.97
CMTM4-202ENST00000394106 ZNF300Q96RE9 604 aaPredicted RBP27.34■■□□□ 1.97
CMTM4-202ENST00000394106 BCO1Q9HAY6 547 aa27.34■■□□□ 1.97
CMTM4-202ENST00000394106 CHST2Q9Y4C5 530 aa27.34■■□□□ 1.97
CMTM4-202ENST00000394106 CCDC168Q8NDH2 2452 aa27.34■■□□□ 1.97
CMTM4-202ENST00000394106 HRNRQ86YZ3 2850 aaPredicted RBP27.34■■□□□ 1.97
CMTM4-202ENST00000394106 VIMP08670 466 aaKnown RBP27.33■■□□□ 1.97
CMTM4-202ENST00000394106 CDK6Q00534 326 aa27.33■■□□□ 1.97
CMTM4-202ENST00000394106 GUCY1A3Q02108 690 aa27.33■■□□□ 1.97
CMTM4-202ENST00000394106 SERPINA11Q86U17 422 aa27.33■■□□□ 1.97
CMTM4-202ENST00000394106 CPPED1Q9BRF8 314 aaPredicted RBP27.33■■□□□ 1.97
CMTM4-202ENST00000394106 ADAM19Q9H013 955 aa27.33■■□□□ 1.97
CMTM4-202ENST00000394106 ST6GALNAC2Q9UJ37 374 aa27.33■■□□□ 1.97
CMTM4-202ENST00000394106 GMEB1Q9Y692 573 aa27.33■■□□□ 1.97
CMTM4-202ENST00000394106 ZNF208O43345 1280 aa27.32■■□□□ 1.96
CMTM4-202ENST00000394106 GPX2P18283 190 aa27.32■■□□□ 1.96
CMTM4-202ENST00000394106 CXCR1P25024 350 aa27.32■■□□□ 1.96
CMTM4-202ENST00000394106 WBP2NLQ6ICG8 309 aa27.32■■□□□ 1.96
CMTM4-202ENST00000394106 REEP3Q6NUK4 255 aa27.32■■□□□ 1.96
CMTM4-202ENST00000394106 C22orf34Q6ZV56 151 aa27.32■■□□□ 1.96
CMTM4-202ENST00000394106 RETREG3Q86VR2 466 aa27.32■■□□□ 1.96
CMTM4-202ENST00000394106 TMEM181Q9P2C4 612 aa27.32■■□□□ 1.96
CMTM4-202ENST00000394106 PLEKHA6Q9Y2H5 1048 aa27.32■■□□□ 1.96
CMTM4-202ENST00000394106 FRS3O43559 492 aa27.31■■□□□ 1.96
CMTM4-202ENST00000394106 ETS2P15036 469 aa27.31■■□□□ 1.96
CMTM4-202ENST00000394106 CRYGSP22914 178 aa27.31■■□□□ 1.96
CMTM4-202ENST00000394106 IST1P53990 364 aa27.31■■□□□ 1.96
CMTM4-202ENST00000394106 SCARB2Q14108 478 aa27.31■■□□□ 1.96
CMTM4-202ENST00000394106 RUNDC3AQ59EK9 446 aa27.31■■□□□ 1.96
CMTM4-202ENST00000394106 ABLIM2Q6H8Q1 611 aa27.31■■□□□ 1.96
CMTM4-202ENST00000394106 CXorf67Q86X51 503 aaPredicted RBP27.31■■□□□ 1.96
CMTM4-202ENST00000394106 PIK3IP1Q96FE7 263 aa27.31■■□□□ 1.96
CMTM4-202ENST00000394106 ACTR6Q9GZN1 396 aa27.31■■□□□ 1.96
CMTM4-202ENST00000394106 EDARQ9UNE0 448 aa27.31■■□□□ 1.96
CMTM4-202ENST00000394106 ZC3H12DA2A288 527 aaKnown RBP27.3■■□□□ 1.96
CMTM4-202ENST00000394106 SIAH2O43255 324 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms