RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 TRABD2BA6NFA1 517 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 GSTZ1O43708 216 aaPredicted RBP10.3□□□□□ -0.76
CUX1-204ENST00000393824 ZNF217O75362 1048 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 OR2A4O95047 310 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 ECDO95905 644 aaPredicted RBP10.3□□□□□ -0.76
CUX1-204ENST00000393824 PLATP00750 562 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 APOC3P02656 99 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 CELA2BP08218 269 aaPredicted RBP10.3□□□□□ -0.76
CUX1-204ENST00000393824 GABRA1P14867 456 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 AK4P27144 223 aaPredicted RBP10.3□□□□□ -0.76
CUX1-204ENST00000393824 IMPA1P29218 277 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 S100A11P31949 105 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 RAP2BP61225 183 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 FGL1Q08830 312 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 PIN1Q13526 163 aaPredicted RBP10.3□□□□□ -0.76
CUX1-204ENST00000393824 ZSWIM7Q19AV6 140 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 TMEM44Q2T9K0 475 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 RPS26P11Q5JNZ5 115 aaPredicted RBP10.3□□□□□ -0.76
CUX1-204ENST00000393824 ADNP2Q6IQ32 1131 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 SMARCD3Q6STE5 483 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 ZNF322Q6U7Q0 402 aaPredicted RBP10.3□□□□□ -0.76
CUX1-204ENST00000393824 Q6ZTK2 550 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 PDZD9Q8IXQ8 264 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 ZNF454Q8N9F8 522 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 MORN4Q8NDC4 146 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 OR4F15Q8NGB8 312 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 OR1S1Q8NH92 325 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 MED8Q96G25 268 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 HSPA12BQ96MM6 686 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 OR2A7Q96R45 310 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 SLC38A3Q99624 504 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 YIPF4Q9BSR8 244 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 PLA2G12AQ9BZM1 189 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 DMRT3Q9NQL9 472 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 GPR52Q9Y2T5 361 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 A0A0G2JK05 382 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 A0A1B0GUH1 482 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 PQLC2LA1A4F0 135 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 M0R296 226 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 HYAL3O43820 417 aaPredicted RBP10.3□□□□□ -0.76
CUX1-204ENST00000393824 VEGFDO43915 354 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 SH3BGRLO75368 114 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 SHC1P29353 583 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 CDH11P55287 796 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 DGCR2P98153 550 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 MC1RQ01726 317 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 AADACL4Q5VUY2 407 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 ENPP7Q6UWV6 458 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 ALKAL2Q6UX46 152 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 KLBQ86Z14 1044 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 OR11G2Q8NGC1 345 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 OR2L2Q8NH16 312 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 C1orf216Q8TAB5 229 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 TRMT10AQ8TBZ6 339 aaKnown RBP10.3□□□□□ -0.76
CUX1-204ENST00000393824 ASB12Q8WXK4 309 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 OR5P2Q8WZ92 322 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 LINC00615Q96LM1 132 aaPredicted RBP10.3□□□□□ -0.76
CUX1-204ENST00000393824 ZNF607Q96SK3 696 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 WFDC6Q9BQY6 131 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 EPHX3Q9H6B9 360 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 EVA1AQ9H8M9 152 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 PHPT1Q9NRX4 125 aaPredicted RBP10.3□□□□□ -0.76
CUX1-204ENST00000393824 NDRG3Q9UGV2 375 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 GPR34Q9UPC5 381 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 SLC9A8Q9Y2E8 581 aa10.3□□□□□ -0.76
CUX1-204ENST00000393824 PRSS38A1L453 326 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 OR2M5A3KFT3 312 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 HMSDA8MTL9 139 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 METTL12A8MUP2 240 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 CTDSPLO15194 276 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 SDC3O75056 442 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 RP2O75695 350 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 CBX7O95931 251 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 BCHEP06276 602 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 C1GALT1C1LP0DN25 315 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 DRD5P21918 477 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 SOAT1P35610 550 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 TAS2R50P59544 299 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 NFATC4Q14934 902 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 ALG11Q2TAA5 492 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 ZNF791Q3KP31 576 aaPredicted RBP10.29□□□□□ -0.76
CUX1-204ENST00000393824 SFRP5Q5T4F7 317 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 FAM69AQ5T7M9 428 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 LRRTM4Q86VH4 590 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 OR5M9Q8NGP3 310 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 UBE2E3Q969T4 207 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 TMEM159Q96B96 161 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 TMEM19Q96HH6 336 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 DNTTIP1Q9H147 329 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 OR52A5Q9H2C5 316 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 MAN2C1Q9NTJ4 1040 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 DYRK1BQ9Y463 629 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 PRR19A6NJB7 356 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 SLC9B1P1A6NJY1 282 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 FAM74A7A6NL05 159 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 OR52A4PA6NMU1 304 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 POM121CA8CG34 1229 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 LRRN3E7EW58 273 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 H7C2Y5 167 aa10.29□□□□□ -0.76
CUX1-204ENST00000393824 SUSD5O60279 629 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms