RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CXCR1P25024 350 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 COL8A1P27658 744 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 AGFG1P52594 562 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 RAC3P60763 192 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 FOXF2Q12947 444 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 GLIPR1L2Q4G1C9 344 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 SYT14P1Q58G82 188 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 GTF2IRD2BQ6EKJ0 949 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 C8orf82Q6P1X6 216 aaPredicted RBP17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 GTF2IRD2Q86UP8 949 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 GCNT2Q8N0V5 402 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 SMYD1Q8NB12 490 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 OR2T12Q8NG77 320 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 RASSF5Q8WWW0 418 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 CPNE4Q96A23 557 aaPredicted RBP17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 SFXN3Q9BWM7 321 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 RNF122Q9H9V4 155 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 RPS6KB2Q9UBS0 482 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 TAGLN3Q9UI15 199 aa17.03■□□□□ 0.32
PDLIM7-204ENST00000393546 INTS1Q8N201 2190 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 ELOVL7A1L3X0 281 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 AQP8O94778 261 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 IFNA14P01570 189 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 OPN1SWP03999 348 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 C8BP07358 591 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 GRNP28799 593 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 KCNJ5P48544 419 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 SLC7A2P52569 658 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 PSME3P61289 254 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 HOXC5Q00444 222 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 LIPEQ05469 1076 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 DUSP7Q16829 419 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 FAM91A1Q658Y4 838 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 TMPPEQ6ZT21 453 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 MICU2Q8IYU8 434 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 DDIT4LQ96D03 193 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 LRRC46Q96FV0 321 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 COQ10BQ9H8M1 238 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 USP22Q9UPT9 525 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 HDGFL3Q9Y3E1 203 aa17.02■□□□□ 0.32
PDLIM7-204ENST00000393546 ASH1LQ9NR48 2969 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 A0A1W2PNV4 684 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 TMEM72A0PK05 275 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 SULT2B1O00204 365 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 SYT5O00445 386 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 ZNF208O43345 1280 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 LGI1O95970 557 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 CPA2P48052 419 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 RGS8P57771 180 aaPredicted RBP17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 NCALDP61601 193 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 CSNK2A1P68400 391 aaPredicted RBP17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 ZNF239Q16600 458 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 COMTD1Q86VU5 262 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 MCEMP1Q8IX19 187 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 CNEP1R1Q8N9A8 125 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 RELL2Q8NC24 303 aaPredicted RBP17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 OR52E4Q8NGH9 312 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 ROBO4Q8WZ75 1007 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 TAMM41Q96BW9 452 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 ZNF559Q9BR84 538 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 SRXN1Q9BYN0 137 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 TRIM2Q9C040 744 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 GLRX2Q9NS18 164 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 ARL8BQ9NVJ2 186 aa17.01■□□□□ 0.31
PDLIM7-204ENST00000393546 NME4O00746 187 aa17■□□□□ 0.31
PDLIM7-204ENST00000393546 PLGP00747 810 aaPredicted RBP17■□□□□ 0.31
PDLIM7-204ENST00000393546 ENPP1P22413 925 aa17■□□□□ 0.31
PDLIM7-204ENST00000393546 DIO1P49895 249 aa17■□□□□ 0.31
PDLIM7-204ENST00000393546 ASCL1P50553 236 aa17■□□□□ 0.31
PDLIM7-204ENST00000393546 TFF3Q07654 80 aa17■□□□□ 0.31
PDLIM7-204ENST00000393546 KRT72Q14CN4 511 aa17■□□□□ 0.31
PDLIM7-204ENST00000393546 RANBP3LQ86VV4 465 aaPredicted RBP17■□□□□ 0.31
PDLIM7-204ENST00000393546 FITM2Q8N6M3 262 aa17■□□□□ 0.31
PDLIM7-204ENST00000393546 LSMEM1Q8N8F7 131 aa17■□□□□ 0.31
PDLIM7-204ENST00000393546 GPR32P1Q8NGA4 272 aa17■□□□□ 0.31
PDLIM7-204ENST00000393546 C3orf49Q96BT1 292 aa17■□□□□ 0.31
PDLIM7-204ENST00000393546 GMPPAQ96IJ6 420 aaPredicted RBP17■□□□□ 0.31
PDLIM7-204ENST00000393546 OR11A1Q9GZK7 315 aa17■□□□□ 0.31
PDLIM7-204ENST00000393546 PIGMQ9H3S5 423 aa17■□□□□ 0.31
PDLIM7-204ENST00000393546 TMEM27Q9HBJ8 222 aa17■□□□□ 0.31
PDLIM7-204ENST00000393546 TESQ9UGI8 421 aaKnown RBP17■□□□□ 0.31
PDLIM7-204ENST00000393546 EEF1E1-BLOC1S5C9J1V9 151 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 C19orf84I3L1E1 186 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 GSTA4O15217 222 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 EEF1E1O43324 174 aaKnown RBP16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 TNFSF13O75888 250 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 FESP07332 822 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 CD247P20963 164 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 KDELR2P33947 212 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 KIR2DL2P43627 348 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 MNAT1P51948 309 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 CTBP2P56545 445 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 SIRPAP78324 504 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 MYBPHQ13203 477 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 RNPS1Q15287 305 aaKnown RBP16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 NRF1Q16656 503 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 HIST2H2BCQ6DN03 193 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 FCRLAQ7L513 359 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 SLC43A2Q8N370 569 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 BCAS4Q8TDM0 211 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms