RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 NSDHLQ15738 373 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 SIMC1Q8NDZ2 872 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 OR7G3Q8NG95 312 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 OR13C5Q8NGS8 318 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 OR13C2Q8NGS9 318 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 SOX7Q9BT81 388 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 SEC16AO15027 2179 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 HIDE1A8MVS5 230 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 FGF4P08620 206 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 TMEM115Q12893 351 aaPredicted RBP13.86□□□□□ -0.19
CCDC50-201ENST00000392455 YIF1BQ5BJH7 314 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 OGFOD3Q6PK18 319 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 WDR20Q8TBZ3 569 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 ZNF689Q96CS4 500 aaPredicted RBP13.86□□□□□ -0.19
CCDC50-201ENST00000392455 RBM24Q9BX46 236 aaKnown RBP13.86□□□□□ -0.19
CCDC50-201ENST00000392455 RDH14Q9HBH5 336 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 FTSJ1Q9UET6 329 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 ZNF337Q9Y3M9 751 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 KCTD3Q9Y597 815 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 NACAE9PAV3 2078 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 NAV1Q8NEY1 1877 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 MPIG6BO95866 241 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 TXNRD3NBQ6F5E7 133 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 OR4C5Q8NGB2 326 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 SIAH2O43255 324 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 HOXA11P31270 313 aaPredicted RBP13.85□□□□□ -0.19
CCDC50-201ENST00000392455 GATMP50440 423 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 COL9A3Q14050 684 aaPredicted RBP13.85□□□□□ -0.19
CCDC50-201ENST00000392455 SLC5A8Q8N695 610 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 OR8U1Q8NH10 309 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 THAP3Q8WTV1 239 aaPredicted RBP13.85□□□□□ -0.19
CCDC50-201ENST00000392455 DIO2Q92813 273 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 B4GALT6Q9UBX8 382 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 PLIN4Q96Q06 1357 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 DDAH2O95865 285 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 ZNF648Q5T619 568 aaPredicted RBP13.85□□□□□ -0.19
CCDC50-201ENST00000392455 C12orf10Q9HB07 376 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 HCRTO43612 131 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 ZNF684Q5T5D7 378 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 TECPR1Q7Z6L1 1165 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 OR51A7Q8NH64 312 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 F10P00742 488 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 DPP4P27487 766 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 AGTR2P50052 363 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 LBHQ53QV2 105 aaPredicted RBP13.85□□□□□ -0.19
CCDC50-201ENST00000392455 DLK2Q6UY11 383 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 CMASQ8NFW8 434 aaPredicted RBP13.85□□□□□ -0.19
CCDC50-201ENST00000392455 C10orf90Q96M02 699 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 A0A0U1RQF3 1178 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 SCO2O43819 266 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 KLF8O95600 359 aaPredicted RBP13.85□□□□□ -0.19
CCDC50-201ENST00000392455 ACP2P11117 423 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 CSNK1A1P48729 337 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 SLC11A1P49279 550 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 SGSHP51688 502 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 STK11Q15831 433 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 ZDHHC24Q6UX98 284 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 COL14A1Q05707 1796 aaKnown RBP13.85□□□□□ -0.19
CCDC50-201ENST00000392455 TMEM200CA6NKL6 621 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 IGHG1P01857 330 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 CPOXP36551 454 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 CTXN1P60606 82 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 LAPTM4AQ15012 233 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 SLC25A21Q9BQT8 299 aaPredicted RBP13.85□□□□□ -0.19
CCDC50-201ENST00000392455 CRLF2Q9HC73 371 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 SULT1A2P50226 295 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 ZNF280AP59817 542 aaPredicted RBP13.85□□□□□ -0.19
CCDC50-201ENST00000392455 FAM122BQ7Z309 247 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 CCDC116Q8IYX3 515 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 KDM8Q8N371 416 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 OR2M7Q8NG81 312 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 BOD1Q96IK1 185 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 FBXL18Q96ME1 805 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 EHFQ9NZC4 300 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 V9GY05 133 aa13.85□□□□□ -0.19
CCDC50-201ENST00000392455 MYOCOSA0A1B0GUC4 107 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 IGFBP1P08833 259 aaPredicted RBP13.84□□□□□ -0.19
CCDC50-201ENST00000392455 VAMP3Q15836 100 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 FBXL20Q96IG2 436 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 GPR62Q9BZJ7 368 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 TM7SF3Q9NS93 570 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 BOKQ9UMX3 212 aaPredicted RBP13.84□□□□□ -0.19
CCDC50-201ENST00000392455 LAMP3Q9UQV4 416 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 ZNF860A6NHJ4 632 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 HPGDSO60760 199 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 ZNF623O75123 536 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 CD79AP11912 226 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 FOLR1P15328 257 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 RABIFP47224 123 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 UQCRFS1P47985 274 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 GABRA4P48169 554 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 LGALS4P56470 323 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 CLDN6P56747 220 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 TAS2R38P59533 333 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 SLC22A6Q4U2R8 563 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 STEAP1BQ6NZ63 245 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 WDR92Q96MX6 357 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 MUS81Q96NY9 551 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 PDCD1LG2Q9BQ51 273 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 CNOT2Q9NZN8 540 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms