RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 C12orf45Q8N5I9 185 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 SEC61A2Q9H9S3 476 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 WASH6PQ9NQA3 447 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 TAF1LQ8IZX4 1826 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 GPR171O14626 319 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 KIAA0355O15063 1070 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 VNN2O95498 520 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 AKAIN1P0CW23 69 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 AKT2P31751 481 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 IGFALSP35858 605 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 UBE2MP61081 183 aaKnown RBP12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 LTBQ06643 244 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 TOMM20Q15388 145 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 HENMT1Q5T8I9 393 aaKnown RBP12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 ARHGAP40Q5TG30 622 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 ARL14Q8N4G2 192 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 TEAD3Q99594 435 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 OR8D2Q9GZM6 311 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 FN3KQ9H479 309 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 CHMP1AQ9HD42 196 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 TM7SF3Q9NS93 570 aa12.23□□□□□ -0.45
TRAPPC9-201ENST00000389328 ARRDC5A6NEK1 342 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 FCMRO60667 390 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 DPM1O60762 260 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 RAB5BP61020 215 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 MRPS10P82664 201 aaKnown RBP12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 ARHGAP19Q14CB8 494 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 CNKSR3Q6P9H4 555 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 TMEFF1Q8IYR6 380 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 CDRT4Q8N9R6 151 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 GPR32P1Q8NGA4 272 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 FOXN4Q96NZ1 517 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 BTBD2Q9BX70 525 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 NRIP3Q9NQ35 241 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 HRASLS2Q9NWW9 162 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 NPFFR2Q9Y5X5 522 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 TMEM14AQ9Y6G1 99 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 CSF1P09603 554 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 ZNF250P15622 560 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 EPHA5P54756 1037 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 ZNF169Q14929 603 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 C1orf94Q6P1W5 598 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 RPL22L1Q6P5R6 122 aaKnown RBP12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 CD163Q86VB7 1156 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 PAQR8Q8TEZ7 354 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 ZFPM2Q8WW38 1151 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 ORAI1Q96D31 301 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 LYSMD1Q96S90 227 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 AUNIPQ9H7T9 357 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 ANKRD61A6NGH8 418 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 RGS11O94810 467 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 TPOP07202 933 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 ATP5A1P25705 553 aaKnown RBP12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 SLC25A35Q3KQZ1 300 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 ABI3BPQ7Z7G0 1075 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 GLB1L2Q8IW92 636 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 PFN4Q8NHR9 129 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 SFXN5Q8TD22 340 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 GPR148Q8TDV2 347 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 CHAC2Q8WUX2 184 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 TRMT61AQ96FX7 289 aaKnown RBP12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 LIN7BQ9HAP6 207 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 KCMF1Q9P0J7 381 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 SBF2Q86WG5 1849 aa12.22□□□□□ -0.45
TRAPPC9-201ENST00000389328 A0A1B0GV50 99 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 HCRTR2O43614 444 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 GXYLT1Q4G148 440 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 KCTD18Q6PI47 426 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 FAM111BQ6SJ93 734 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 OR52E1Q8NGJ3 308 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 DVL3Q92997 716 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 FGF20Q9NP95 211 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 GPR34Q9UPC5 381 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 TEX13DA0A0J9YY54 714 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 SYT5O00445 386 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 PPM1DO15297 605 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 CHP2O43745 196 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 SBK2P0C263 348 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 LIMS3P0CW19 117 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 LIMS4P0CW20 117 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 OPRD1P41143 372 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 RAD52P43351 418 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 TRA2BP62995 288 aaKnown RBP12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 MRPL58Q14197 206 aaKnown RBP12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 KRBOX4Q5JUW0 171 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 ZNF620Q6ZNG0 422 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 TMEM150AQ86TG1 271 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 C12orf76Q8N812 135 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 OR2T4Q8NH00 348 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 LINC01599Q8WXQ3 324 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 MARVELD1Q9BSK0 173 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 TAPBPLQ9BX59 468 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 ERVMER34-1Q9H9K5 563 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 ACTR10Q9NZ32 417 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 EPHA6Q9UF33 1036 aa12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 MBD1Q9UIS9 605 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC9-201ENST00000389328 A0A1W2PQU0 124 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 PRAMEF4O60810 478 aa12.21□□□□□ -0.46
TRAPPC9-201ENST00000389328 MSL3P1P0C860 447 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms