RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 POLHQ9Y253 713 aa21.2■□□□□ 0.98
VPS16-201ENST00000380443 SPTBP11277 2137 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 NUP210LQ5VU65 1888 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 FUOMA2VDF0 154 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 CCDC182A6NF36 153 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 C12orf71A8MTZ7 269 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 UTS2O95399 124 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 PPP1R3DO95685 299 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 SLC2A5P22732 501 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 SLC6A8P48029 635 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 BCAP31P51572 246 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 PRPS1P60891 318 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 CDC20Q12834 499 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 SHBQ15464 509 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 ARHGAP40Q5TG30 622 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 LYSMD2Q8IV50 215 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 TSLPQ969D9 159 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 KISS1RQ969F8 398 aaPredicted RBP21.19■□□□□ 0.98
VPS16-201ENST00000380443 EFHD2Q96C19 240 aaPredicted RBP21.19■□□□□ 0.98
VPS16-201ENST00000380443 BARHL1Q9BZE3 327 aa21.19■□□□□ 0.98
VPS16-201ENST00000380443 NXF5Q9H1B4 397 aaKnown RBP21.19■□□□□ 0.98
VPS16-201ENST00000380443 DHCR7Q9UBM7 475 aaKnown RBP21.19■□□□□ 0.98
VPS16-201ENST00000380443 C2orf92A0A1B0GVN3 265 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 DAPL1A0PJW8 107 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 ARPC3O15145 178 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 ZNF264O43296 627 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 OR7A10O76100 309 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 TAS2R43P59537 309 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 ANGPT1Q15389 498 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 TRAM1Q15629 374 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 SNAP47Q5SQN1 464 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 HLA-DQA1Q5Y7H0 255 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 C22orf42Q6IC83 251 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.18■□□□□ 0.98
VPS16-201ENST00000380443 KCNS3Q9BQ31 491 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 TGIF2Q9GZN2 237 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 LAT2Q9GZY6 243 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 IRF2BPLQ9H1B7 796 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 FGF21Q9NSA1 209 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 COPS7AQ9UBW8 275 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 CHRNA9Q9UGM1 479 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 FBXO4Q9UKT5 387 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 PCDHGB6Q9Y5F9 930 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 GTPBP1O00178 669 aaKnown RBP21.18■□□□□ 0.98
VPS16-201ENST00000380443 ANKRD34CP0C6C1 535 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 ACY1Q03154 408 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 LGALS3BPQ08380 585 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 SKP2Q13309 424 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 KLHL12Q53G59 568 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 C17orf47Q8NEP4 570 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 ALG8Q9BVK2 526 aa21.18■□□□□ 0.98
VPS16-201ENST00000380443 ZNF318Q5VUA4 2279 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 A0A1W2PQD3 144 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 ELOA3DA6NLF2 546 aaPredicted RBP21.17■□□□□ 0.98
VPS16-201ENST00000380443 CTDSP2O14595 271 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 SBK2P0C263 348 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 EPHA8P29322 1005 aaPredicted RBP21.17■□□□□ 0.98
VPS16-201ENST00000380443 TNFSF8P32971 234 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 RPS7P62081 194 aaKnown RBP21.17■□□□□ 0.98
VPS16-201ENST00000380443 DMWDQ09019 674 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 CRMP1Q14194 572 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 NSDHLQ15738 373 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 TBC1D25Q3MII6 688 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 ELOA3BQ3SY89 546 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 LCN1P1Q5VSP4 162 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 RABEPKQ7Z6M1 372 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 ARIH2OSQ8N7S6 290 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 ATP6V1C2Q8NEY4 427 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 ELOA3Q8NG57 546 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 PHOSPHO1Q8TCT1 267 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 TMEM203Q969S6 136 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 CCDC74AQ96AQ1 378 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 ERMAPQ96PL5 475 aaPredicted RBP21.17■□□□□ 0.98
VPS16-201ENST00000380443 GPX7Q96SL4 187 aaPredicted RBP21.17■□□□□ 0.98
VPS16-201ENST00000380443 NDEL1Q9GZM8 345 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 MED20Q9H944 212 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 CPNE5Q9HCH3 593 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 TRIM36Q9NQ86 728 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 PRMT8Q9NR22 394 aaPredicted RBP21.17■□□□□ 0.98
VPS16-201ENST00000380443 TOR4AQ9NXH8 423 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 QPCTLQ9NXS2 382 aa21.17■□□□□ 0.98
VPS16-201ENST00000380443 A8MUA0 341 aa21.16■□□□□ 0.98
VPS16-201ENST00000380443 MT-ND5P03915 603 aa21.16■□□□□ 0.98
VPS16-201ENST00000380443 DEFA1P59665 94 aa21.16■□□□□ 0.98
VPS16-201ENST00000380443 DEFA3P59666 94 aa21.16■□□□□ 0.98
VPS16-201ENST00000380443 FABP5Q01469 135 aa21.16■□□□□ 0.98
VPS16-201ENST00000380443 NR0B2Q15466 257 aa21.16■□□□□ 0.98
VPS16-201ENST00000380443 ZNF791Q3KP31 576 aaPredicted RBP21.16■□□□□ 0.98
VPS16-201ENST00000380443 SLC29A4Q7RTT9 530 aa21.16■□□□□ 0.98
VPS16-201ENST00000380443 ATG4DQ86TL0 474 aaPredicted RBP21.16■□□□□ 0.98
VPS16-201ENST00000380443 OR1N1Q8NGS0 311 aa21.16■□□□□ 0.98
VPS16-201ENST00000380443 CLIP3Q96DZ5 547 aa21.16■□□□□ 0.98
VPS16-201ENST00000380443 NUDT9Q9BW91 350 aa21.16■□□□□ 0.98
VPS16-201ENST00000380443 ABCB10Q9NRK6 738 aa21.16■□□□□ 0.98
VPS16-201ENST00000380443 SLC6A5Q9Y345 797 aa21.16■□□□□ 0.98
VPS16-201ENST00000380443 CMAHPQ9Y471 501 aa21.16■□□□□ 0.98
VPS16-201ENST00000380443 NOX1Q9Y5S8 564 aa21.16■□□□□ 0.98
VPS16-201ENST00000380443 COL5A1P20908 1838 aaPredicted RBP21.16■□□□□ 0.98
VPS16-201ENST00000380443 A8MU76 341 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 LALBAP00709 142 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms