RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 RFLNBQ8N5W9 214 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 MRPL43Q8N983 215 aaKnown RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 UXS1Q8NBZ7 420 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 OR7G2Q8NG99 324 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 OR4D9Q8NGE8 314 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 MRPS24Q96EL2 167 aaKnown RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF514Q96K75 400 aaPredicted RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 SPATA5L1Q9BVQ7 753 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 PITHD1Q9GZP4 211 aaPredicted RBP11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 FN3KQ9H479 309 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 SLC22A11Q9NSA0 550 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 CTSFQ9UBX1 484 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 PCOLCE2Q9UKZ9 415 aa11.55□□□□□ -0.56
PRPF40B-202ENST00000380281 FABP1P07148 127 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 ADRB1P08588 477 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 AHCYP23526 432 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 PSMB10P40306 273 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 TPBGQ13641 420 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 MAPK14Q16539 360 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 VITQ6UXI7 678 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 SFTPA2Q8IWL1 248 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 GNPDA2Q8TDQ7 276 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 TRIM43Q96BQ3 446 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 MS4A6EQ96DS6 147 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 PTCHD1Q96NR3 888 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 NKX3-1Q99801 234 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 GAL3ST1Q99999 423 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 C19orf43Q9BQ61 176 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 MED18Q9BUE0 208 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 OR52D1Q9H346 318 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 UBQLN3Q9H347 655 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 CACYBPQ9HB71 228 aaKnown RBP11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 TINAGQ9UJW2 476 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 MRTO4Q9UKD2 239 aaKnown RBP11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 H0Y8X5 98 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 AIPO00170 330 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 IMPA2O14732 288 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 ADH1CP00326 375 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 TFP02787 698 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 H2AFB2P0C5Z0 115 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF888P0CJ79 500 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 CENPAP49450 140 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 GAS1P54826 345 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 TSPAN31Q12999 210 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 METRNLQ641Q3 311 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 VASNQ6EMK4 673 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 MZT2AQ6P582 158 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 THSD4Q6ZMP0 1018 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 Q6ZTK2 550 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 SIAH3Q8IW03 269 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 NRSN1Q8IZ57 195 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 RELL2Q8NC24 303 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 FBXO15Q8NCQ5 510 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 ZMYND19Q96E35 227 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 GSDMCQ9BYG8 508 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 SLC6A20Q9NP91 592 aa11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 AK6Q9Y3D8 172 aaKnown RBP11.54□□□□□ -0.56
PRPF40B-202ENST00000380281 TBC1D3DA0A087WVF3 549 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 TBC1D3IA0A087WXS9 549 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 TBC1D3EA0A087X179 549 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 TBC1D3KA0A087X1G2 549 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 ABHD14A-ACY1A0A1B0GW23 586 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 TBC1D3FA6NER0 549 aaPredicted RBP11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 A8MVJ9 347 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 TBC1D3LB9A6J9 549 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 EML2O95834 649 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 CLTBP09497 229 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 TBC1D3HP0C7X1 549 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 TEAD1P28347 426 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 IFNGR2P38484 337 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 REEP5Q00765 189 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 PGGHGQ32M88 737 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 TBC1D3GQ6DHY5 549 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 TBC1D3CQ6IPX1 549 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 ABHD17CQ6PCB6 329 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 PRSS41Q7RTY9 318 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 TBC1D3Q8IZP1 549 aaPredicted RBP11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 OR2T33Q8NG76 320 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 ELP4Q96EB1 424 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 PPP1R16AQ96I34 528 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 C4orf36Q96KX1 117 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 CMSS1Q9BQ75 279 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 TEX12Q9BXU0 123 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 SLC19A3Q9BZV2 496 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 ABCD4O14678 606 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 FKTNO75072 461 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 GSTM3P21266 225 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 NT5EP21589 574 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 OMPP47874 163 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 KCNJ3P48549 501 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 SGCGQ13326 291 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 SWI5Q1ZZU3 235 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 HFEQ30201 348 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF658BQ4V348 819 aaPredicted RBP11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 ZNF542PQ5EBM4 170 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 PRPF38BQ5VTL8 546 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 SLC6A19Q695T7 634 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 FAAP20Q6NZ36 180 aa11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 FIP1L1Q6UN15 594 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-202ENST00000380281 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms