RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 C14orf28Q4W4Y0 310 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 GPALPP1Q8IXQ4 340 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 SLC25A45Q8N413 288 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 ZNF615Q8N8J6 731 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 SAP25Q8TEE9 199 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 NACC2Q96BF6 587 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 TGM7Q96PF1 710 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 ALG8Q9BVK2 526 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 TMEM9BQ9NQ34 198 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 BABAM2Q9NXR7 383 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 SCN2AQ99250 2005 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 TRAV27A0A087WT01 109 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 SERINC4A6NH21 518 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 CASKO14936 926 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 PPM1BO75688 479 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 CLEC2LP0C7M8 214 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 BCORP1Q8N888 145 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 ZFP41Q8N8Y5 198 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 PTP4A1Q93096 173 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 TEAD3Q99594 435 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 SRRQ9GZT4 340 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 HOXD1Q9GZZ0 328 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 KCNN2Q9H2S1 579 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 RERGLQ9H628 205 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 TRIM36Q9NQ86 728 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 SERTAD3Q9UJW9 196 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 MMACHCQ9Y4U1 282 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 IGHV5-51A0A0C4DH38 117 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 DAPL1A0PJW8 107 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 CCDC182A6NF36 153 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 C4orf47A7E2U8 309 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 GABRPO00591 440 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 ADAM11O75078 769 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 IFNA16P05015 189 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 MAOAP21397 527 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 SLC2A5P22732 501 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 CD1CP29017 333 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 PPM1FP49593 454 aaPredicted RBP19.78■□□□□ 0.76
TRIM54-202ENST00000380075 PGDP52209 483 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 TAS2R43P59537 309 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 PPP3R1P63098 170 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 ERV3-1Q14264 604 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 KLHL12Q53G59 568 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 XKRXQ6PP77 449 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 KLBQ86Z14 1044 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 OR8H2Q8N162 312 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 OR51A7Q8NH64 312 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 TMED9Q9BVK6 235 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 MED20Q9H944 212 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 MCCC2Q9HCC0 563 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 ABCB9Q9NP78 766 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 ICAM5Q9UMF0 924 aa19.78■□□□□ 0.76
TRIM54-202ENST00000380075 GVINP1Q7Z2Y8 2422 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 A0A1W2PQL4 384 aaPredicted RBP19.77■□□□□ 0.76
TRIM54-202ENST00000380075 CSTAP01040 98 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 GFERP55789 205 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 ACTC1P68032 377 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 ACTA1P68133 377 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 CRYZQ08257 329 aaKnown RBP19.77■□□□□ 0.76
TRIM54-202ENST00000380075 TRAM1Q15629 374 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 ZNF79Q15937 498 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 GLYR1Q49A26 553 aaPredicted RBP19.77■□□□□ 0.76
TRIM54-202ENST00000380075 KIRREL2Q6UWL6 708 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 GDPD3Q7L5L3 318 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 KANSL1Q7Z3B3 1105 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 MARCH9Q86YJ5 346 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 GDPD1Q8N9F7 314 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 MVB12AQ96EY5 273 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 TXNDC15Q96J42 360 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 MIXL1Q9H2W2 232 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 PCDHGB2Q9Y5G2 931 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 DMXL1Q9Y485 3027 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 FAM186AA6NE01 2351 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 CFAP54Q96N23 3096 aa19.77■□□□□ 0.76
TRIM54-202ENST00000380075 RHPN2P1A8MT19 583 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 YKT6O15498 198 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 NDUFB2O95178 105 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 NOS3P29474 1203 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 ADH7P40394 386 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 RPS7P62081 194 aaKnown RBP19.77■□□□□ 0.75
TRIM54-202ENST00000380075 ZNF362Q5T0B9 420 aaPredicted RBP19.77■□□□□ 0.75
TRIM54-202ENST00000380075 SLITRK4Q8IW52 837 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 CADM2Q8N3J6 435 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 SYT14Q8NB59 555 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 NEIL3Q8TAT5 605 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 SGTBQ96EQ0 304 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 OR1F2PQ96R84 312 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 TNFRSF13CQ96RJ3 184 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 NDC1Q9BTX1 674 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 HCAR1Q9BXC0 346 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 SLC19A3Q9BZV2 496 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 KLHL21Q9UJP4 597 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 CABIN1Q9Y6J0 2220 aa19.77■□□□□ 0.75
TRIM54-202ENST00000380075 A0A087WUJ7 227 aa19.76■□□□□ 0.75
TRIM54-202ENST00000380075 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.76■□□□□ 0.75
TRIM54-202ENST00000380075 POLR1CO15160 346 aaPredicted RBP19.76■□□□□ 0.75
TRIM54-202ENST00000380075 RNF13O43567 381 aa19.76■□□□□ 0.75
TRIM54-202ENST00000380075 RGS9O75916 674 aaPredicted RBP19.76■□□□□ 0.75
TRIM54-202ENST00000380075 PPP1R3DO95685 299 aa19.76■□□□□ 0.75
TRIM54-202ENST00000380075 MT-ND5P03915 603 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms