RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 MTNR1AP48039 350 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 NXPH1P58417 271 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 MLLT1Q03111 559 aaPredicted RBP7.59□□□□□ -1.19
UBR4-202ENST00000375224 MAPK14Q16539 360 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 PGGHGQ32M88 737 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 SPANXN2Q5MJ10 180 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 ZBTB37Q5TC79 503 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 RHOUQ7L0Q8 258 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 SLC43A2Q8N370 569 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 SPEM1Q8N4L4 309 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 DEFB119Q8N690 84 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 BRIX1Q8TDN6 353 aaKnown RBP7.59□□□□□ -1.19
UBR4-202ENST00000375224 TMEM255BQ8WV15 326 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 DNAJA4Q8WW22 397 aaPredicted RBP7.59□□□□□ -1.19
UBR4-202ENST00000375224 TMEM239Q8WW34 195 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 HLA-CQ95604 372 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 YIPF5Q969M3 257 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 RNFT2Q96EX2 444 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 PEX11GQ96HA9 241 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 TRIM2Q9C040 744 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 NXF2Q9GZY0 626 aaKnown RBP7.59□□□□□ -1.19
UBR4-202ENST00000375224 CHMP1AQ9HD42 196 aaPredicted RBP7.59□□□□□ -1.19
UBR4-202ENST00000375224 Q9N2J8 555 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 TAS2R16Q9NYV7 291 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 HCN3Q9P1Z3 774 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 PEX16Q9Y5Y5 336 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 SLCO1B1Q9Y6L6 691 aa7.59□□□□□ -1.19
UBR4-202ENST00000375224 MN1Q10571 1320 aaPredicted RBP7.59□□□□□ -1.19
UBR4-202ENST00000375224 TMEM129A0AVI4 362 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 GXYLT2A0PJZ3 443 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 TTLL8A6PVC2 850 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 H7C2Y5 167 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 THY1P04216 161 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 GNSP15586 552 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 GPR4P46093 362 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 NUBP1P53384 320 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 LIMK1P53667 647 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 LSM11P83369 360 aaKnown RBP eCLIP7.58□□□□□ -1.24e-7■■□□□ 14.1
UBR4-202ENST00000375224 PRKCDQ05655 676 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 ANKRD39Q53RE8 183 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 Q5BKY6 102 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 GDPD3Q7L5L3 318 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 ZNF550Q7Z398 422 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 ATCAYQ86WG3 371 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 CMIPQ8IY22 773 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 POGLUT1Q8NBL1 392 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 OR8D4Q8NGM9 314 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 OIT3Q8WWZ8 545 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 FYTTD1Q96QD9 318 aaKnown RBP7.58□□□□□ -1.2
UBR4-202ENST00000375224 PRO3102Q9H379 93 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 RDH8Q9NYR8 311 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 PRODH2Q9UF12 536 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 NTNG1Q9Y2I2 539 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 MED31Q9Y3C7 131 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 CSNK1G3Q9Y6M4 447 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 FITM1A5D6W6 292 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 PEX12O00623 359 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 SURF4O15260 269 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 HOXD4P09016 255 aaPredicted RBP7.58□□□□□ -1.2
UBR4-202ENST00000375224 CKMT1AP12532 417 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 S1PR1P21453 382 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 GRK5P34947 590 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 PGDP52209 483 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 ANGPT1Q15389 498 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 CCDC85BQ15834 202 aaPredicted RBP7.58□□□□□ -1.2
UBR4-202ENST00000375224 AMZ1Q400G9 498 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 FAM76BQ5HYJ3 339 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 PTP4A1Q93096 173 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 MMABQ96EY8 250 aaPredicted RBP7.58□□□□□ -1.2
UBR4-202ENST00000375224 AHCYL2Q96HN2 611 aaKnown RBP7.58□□□□□ -1.2
UBR4-202ENST00000375224 RADILQ96JH8 1075 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 TGM7Q96PF1 710 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 PRSS27Q9BQR3 290 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 COPZ2Q9P299 210 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 LAMP5Q9UJQ1 280 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 STUB1Q9UNE7 303 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 SSR3Q9UNL2 185 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 CIB4A0PJX0 185 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 SLC22A5O76082 557 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 TRAPPC2P0DI81 140 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 TRAPPC2BP0DI82 140 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 RBM34P42696 430 aaKnown RBP7.58□□□□□ -1.2
UBR4-202ENST00000375224 GABRA4P48169 554 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 EMDP50402 254 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 GBX2P52951 348 aaPredicted RBP7.58□□□□□ -1.2
UBR4-202ENST00000375224 CDH11P55287 796 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 WNT4P56705 351 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 RNF4P78317 190 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 CLEC12AQ5QGZ9 265 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 NXNL2Q5VZ03 156 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 PTCRAQ6ISU1 281 aaPredicted RBP7.58□□□□□ -1.2
UBR4-202ENST00000375224 TMPRSS11FQ6ZWK6 438 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 GID4Q8IVV7 300 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 LNX2Q8N448 690 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 DOK4Q8TEW6 326 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 VSTM2LQ96N03 204 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 SLC19A3Q9BZV2 496 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 FN3KQ9H479 309 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 HHATLQ9HCP6 504 aa7.58□□□□□ -1.2
UBR4-202ENST00000375224 FBXO34Q9NWN3 711 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms