RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 C17orf82Q86X59 251 aaPredicted RBP17.19■□□□□ 0.34
USP49-202ENST00000373010 EGFL6Q8IUX8 553 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.19■□□□□ 0.34
USP49-202ENST00000373010 ZMYND19Q96E35 227 aaPredicted RBP17.19■□□□□ 0.34
USP49-202ENST00000373010 NDC1Q9BTX1 674 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 INPP5EQ9NRR6 644 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 CACNA1IQ9P0X4 2223 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 EFCAB7A8K855 629 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 OIP5O43482 229 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 NDUFB2O95178 105 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 IFNGP01579 166 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 GPR143P51810 404 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 RACK1P63244 317 aaKnown RBP17.19■□□□□ 0.34
USP49-202ENST00000373010 CCDC85BQ15834 202 aaPredicted RBP17.19■□□□□ 0.34
USP49-202ENST00000373010 TCTE1Q5JU00 501 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 CMIPQ8IY22 773 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 C17orf47Q8NEP4 570 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 SERTAD3Q9UJW9 196 aa17.19■□□□□ 0.34
USP49-202ENST00000373010 A0A087WUJ7 227 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 MAGEB4O15481 346 aaPredicted RBP17.18■□□□□ 0.34
USP49-202ENST00000373010 SHC1P29353 583 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 RPL6Q02878 288 aaKnown RBP17.18■□□□□ 0.34
USP49-202ENST00000373010 P2RY14Q15391 338 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 PRAMEF17Q5VTA0 474 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 AGAP6Q5VW22 663 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 TTLL10Q6ZVT0 673 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 MED25Q71SY5 747 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 PTPMT1Q8WUK0 201 aaPredicted RBP17.18■□□□□ 0.34
USP49-202ENST00000373010 SLC35B4Q969S0 331 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 C3orf49Q96BT1 292 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 ZNF578Q96N58 590 aaPredicted RBP17.18■□□□□ 0.34
USP49-202ENST00000373010 AGAP4Q96P64 663 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 ERVMER34-1Q9H9K5 563 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 LANCL2Q9NS86 450 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 PAIP2BQ9ULR5 123 aaKnown RBP17.18■□□□□ 0.34
USP49-202ENST00000373010 ICAM5Q9UMF0 924 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 GRIP1Q9Y3R0 1128 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 MPDZO75970 2070 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 IMPA2O14732 288 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 ALAS2P22557 587 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 ASAH1Q13510 395 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 GRM7Q14831 915 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 CD226Q15762 336 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.18■□□□□ 0.34
USP49-202ENST00000373010 KLHL26Q53HC5 615 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 VASH1Q7L8A9 365 aaPredicted RBP17.18■□□□□ 0.34
USP49-202ENST00000373010 UBE2J2Q8N2K1 259 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 OR5J2Q8NH18 312 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 HSPA12BQ96MM6 686 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 C11orf54Q9H0W9 315 aaPredicted RBP17.18■□□□□ 0.34
USP49-202ENST00000373010 MMP28Q9H239 520 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 SDK1Q7Z5N4 2213 aa17.18■□□□□ 0.34
USP49-202ENST00000373010 FITM1A5D6W6 292 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 RHPN2P1A8MT19 583 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 A8MU76 341 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 LMO7DNF2Z398 122 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 H0YIG0 161 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 DYRK3O43781 588 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 TFP02787 698 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 GALP22466 123 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 RPL4P36578 427 aaKnown RBP17.17■□□□□ 0.34
USP49-202ENST00000373010 ACVR1BP36896 505 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 ZSWIM7Q19AV6 140 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 C14orf28Q4W4Y0 310 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 UBQLNLQ8IYU4 475 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 TSLPQ969D9 159 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 KIAA1143Q96AT1 154 aaPredicted RBP17.17■□□□□ 0.34
USP49-202ENST00000373010 AHCYL2Q96HN2 611 aaKnown RBP17.17■□□□□ 0.34
USP49-202ENST00000373010 SOSTQ9BQB4 213 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 KCNN2Q9H2S1 579 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 CUTCQ9NTM9 273 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 HAO2Q9NYQ3 351 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 PRODH2Q9UF12 536 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 RNF215Q9Y6U7 377 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 TFECO14948 347 aaPredicted RBP17.17■□□□□ 0.34
USP49-202ENST00000373010 EVX1P49640 407 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 CSNK1EP49674 416 aaKnown RBP17.17■□□□□ 0.34
USP49-202ENST00000373010 OR1D5P58170 312 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 SERTAD2Q14140 314 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 IDNKQ5T6J7 187 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 ZNF517Q6ZMY9 492 aaPredicted RBP17.17■□□□□ 0.34
USP49-202ENST00000373010 ZNRF4Q8WWF5 429 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 PPP1R3EQ9H7J1 279 aa17.17■□□□□ 0.34
USP49-202ENST00000373010 UBE2ZQ9H832 354 aaPredicted RBP17.17■□□□□ 0.34
USP49-202ENST00000373010 PLPP2O43688 288 aa17.16■□□□□ 0.34
USP49-202ENST00000373010 PYCR1P32322 319 aa17.16■□□□□ 0.34
USP49-202ENST00000373010 NAA10P41227 235 aaPredicted RBP17.16■□□□□ 0.34
USP49-202ENST00000373010 MTNR1BP49286 362 aa17.16■□□□□ 0.34
USP49-202ENST00000373010 CCR4P51679 360 aa17.16■□□□□ 0.34
USP49-202ENST00000373010 TP53I3Q53FA7 332 aa17.16■□□□□ 0.34
USP49-202ENST00000373010 GPALPP1Q8IXQ4 340 aa17.16■□□□□ 0.34
USP49-202ENST00000373010 SLC2A12Q8TD20 617 aa17.16■□□□□ 0.34
USP49-202ENST00000373010 CHAC2Q8WUX2 184 aa17.16■□□□□ 0.34
USP49-202ENST00000373010 TP53INP1Q96A56 240 aa17.16■□□□□ 0.34
USP49-202ENST00000373010 ASXL3Q9C0F0 2248 aa17.16■□□□□ 0.34
USP49-202ENST00000373010 OR8D2Q9GZM6 311 aa17.16■□□□□ 0.34
USP49-202ENST00000373010 NXF5Q9H1B4 397 aaKnown RBP17.16■□□□□ 0.34
USP49-202ENST00000373010 CCDC86Q9H6F5 360 aaKnown RBP17.16■□□□□ 0.34
USP49-202ENST00000373010 DHCR7Q9UBM7 475 aaKnown RBP17.16■□□□□ 0.34
USP49-202ENST00000373010 GMEB2Q9UKD1 530 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms